DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and TRIP13

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_004228.1 Gene:TRIP13 / 9319 HGNCID:12307 Length:432 Species:Homo sapiens


Alignment Length:23 Identity:9/23 - (39%)
Similarity:13/23 - (56%) Gaps:0/23 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 KCIEKNGRDANDCNNLRDYVRSI 105
            |.:||..||..:..|.||.::.|
Human    26 KRLEKLKRDLQNIKNERDILQGI 48

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729 4/13 (31%)
CDC48 365..983 CDD:273521
RecA-like_PEX1_r2 728..885 CDD:410934
TRIP13NP_004228.1 McrB 34..>205 CDD:441011 5/15 (33%)
RecA-like_Pch2-like 121..319 CDD:410916
Blue background indicates that the domain is not in the aligned region.

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