DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and RIX7

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_013066.1 Gene:RIX7 / 850625 SGDID:S000003957 Length:837 Species:Saccharomyces cerevisiae


Alignment Length:916 Identity:223/916 - (24%)
Similarity:380/916 - (41%) Gaps:203/916 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 ELTEKLTPLTHSSTVSNVKNTIQRNKRQDHMERLKKDLRRESSRSFEFRVIRGLWREQAQESDVF 265
            ::..|...|| ||..:.:.:.|.|...:..::| |:.||:||...      .|...|..::.|:|
Yeast     3 KVKSKKNSLT-SSLDNKIVDLIYRLLEEKTLDR-KRSLRQESQGE------EGENNEGEEDEDIF 59

  Fly   266 VNGKHLPEFFDLDLFYCMHTAADKDYYVRVRTVEDDIEDDLPETIHPSIELNANLMKLLGIKELE 330
            .:     .||..||     ||.:...:.                          |.|.|.::.::
Yeast    60 ES-----MFFAKDL-----TAGEIFTFC--------------------------LTKDLSLQRVK 88

  Fly   331 RVVLRPKT--TVVNFVEKIEL--------FANKKTHYKIMEN--AFKRFVIERTQHKPMLFNQ-- 381
            :|||: ||  .::..|.:.||        :.|::.....:|.  |.|..:|||..::   .|:  
Yeast    89 KVVLQ-KTIDRMLKDVIESELEEFGSYPGYNNEEEEKPSLEEELAKKNMMIERDTNE---MNKRI 149

  Fly   382 -----------EEVVRLEDDLLVTVGILPEHFR--YCVVDAQFLKESKIYAADLVRPVGEIIKEE 433
                       |.:...:|.....|....:..:  .|.|..|.:||                 :.
Yeast   150 TSTWSKSGSVSESITETDDPKTEEVKKSKKRSKEGTCKVKRQKIKE-----------------DR 197

  Fly   434 TPPTSPLSVQDLIQLPEYDKIVDQVVQELRMNLC---LSADNSVMRQCNVLLAGASGTGKTVLVE 495
            :||.|.|.     .|...|.:|.|:::.:.:.:.   :.....|.....|||.|..|.|||.:..
Yeast   198 SPPNSSLK-----SLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIAN 257

  Fly   496 RILDQLSRKPDYCHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLA--HAAG 558
            .:..:| :.|   .......|...|...|| :|.:|::|......||.:|..:.:|.:.  ...|
Yeast   258 ALAGEL-QVP---FISISAPSVVSGMSGES-EKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGG 317

  Fly   559 EQSSQDGEYYNRMADTVYQLIVQYTTNNAIAVIATVNELQTLNKRLSSPRGRHVFQTVARLPNLE 623
            .|...:.....::..::.:|.::.|....:.:|...|...:|:..|.. .||...:....:||  
Yeast   318 AQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRR-AGRFDREICLNVPN-- 379

  Fly   624 RADREIILRELCSHINVAKDLDLVKFSNLTEGYRKCDLVQFVERA-------IFYAYRISKTQPL 681
            ...|..||:::..::.:...:|..|.:.||.|:...||...|..|       ||..|...|:.|.
Yeast   380 EVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIKSTPT 444

  Fly   682 LTNDQLIESLEHTNSYCLQGIQSN-QRTGNDADANEMRV-------------------------- 719
            ...|...:::|...:  ..|.:|: :.|.|..|...:.|                          
Yeast   445 TATDSSEDNMEIDET--ANGDESSLKNTANMIDPLPLSVVQQFIRNYPEPLSGEQLSLLSIKYED 507

  Fly   720 --EELPGLESV----------------VGVLEEV-------LMWPSRYPTIFNASPLRNQAGVLL 759
              :.||.::..                ||.|:.|       ::.|.:.|.::....:....||||
Yeast   508 FLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLL 572

  Fly   760 YGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDS 824
            :||||.|||.|...:|.......||:||||||.||:|:||.::|.:|.|||::.|||:||||.|:
Yeast   573 WGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDA 637

  Fly   825 LAPKRGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPD 889
            |.|:|....:..:.||||.|||||||:...:|:.||.||:||:::|||:||.||:|:.:...||:
Yeast   638 LVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPN 702

  Fly   890 APARVRIFEALSST----LSLDECVDFDWFA--GKTANYTGADIQSILTSANMAAVKEALAQFGH 948
            ...::.|.:.|:.:    ||.|  |||:...  .|..|::|||:.:::..:::.|:|...  |..
Yeast   703 TEEKLDIIKTLTKSHGTPLSSD--VDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKF--FQS 763

  Fly   949 EKL--------------------AKKISLKQKHLIESFQTTRPSLSASDVAKYHRTYAR--FTNK 991
            |::                    .::|.:.......:.:..:||:|..|..||.|...:  .|.:
Yeast   764 EEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLKYDRLNKKMGLTEE 828

  Fly   992 EKTSRE 997
            .|.:.|
Yeast   829 MKDAEE 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 182/722 (25%)
RecA-like_PEX1_r2 728..885 CDD:410934 74/179 (41%)
RIX7NP_013066.1 CDC48 <192..824 CDD:273521 172/667 (26%)
Blue background indicates that the domain is not in the aligned region.

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