DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and AT1G62130

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_176404.3 Gene:AT1G62130 / 842509 AraportID:AT1G62130 Length:1043 Species:Arabidopsis thaliana


Alignment Length:907 Identity:183/907 - (20%)
Similarity:332/907 - (36%) Gaps:254/907 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 SMQVALTVDRLKPHMNYGRIDHNTELVVAPNLYKGL-----TNGTSNGVIEENTKLSRSK-TTAQ 197
            ||..:|.:.|..|              ....:.:|:     .|..||...:....:|.:: :..:
plant   226 SMLASLEISRENP--------------ATSGVQEGVEGYFPVNNQSNKAADSGVVISHNQDSKME 276

  Fly   198 VKDELTEKLTPLTHSSTVSNVKNTIQRNKRQDHMERLKKDLRRESSRSFEFRVIRGLWREQAQES 262
            :.||                 :|.:.||:|.....:.::.:|            .|:        
plant   277 ILDE-----------------ENEVTRNRRAQQAAKFREYIR------------AGI-------- 304

  Fly   263 DVFVNGKHLPEFFDLDLFYCM-HT----AADKDYYVRVRTV-EDDIEDDLPETIHPSIELNANLM 321
               |:||.|...|:...:|.. ||    .|..|.::....: ......|| ..::|.|.|:..  
plant   305 ---VDGKRLEFSFENFPYYLSEHTKYVLLAVSDMHLNKMNIGYAPYASDL-TILNPRILLSGP-- 363

  Fly   322 KLLGIKELERVVLRPKTTVVNFVEKIELFANKKTHYKIMENAFKRFVIERTQHKPMLFNQEEVVR 386
               ...|:.:.:| .|....:|..|:.:|.:......:....|     |...:.|.|.::.:.:.
plant   364 ---AGSEIYQEIL-AKALANSFNAKLLIFDSNPILGVMTAKEF-----ESLMNGPALIDRGKSLD 419

  Fly   387 LE----DDLLVTVGILPEHFRYCVVDAQFLKESKIYAADLVRPVGEIIKEETPPTSPLSVQDLIQ 447
            |.    |..:.:....|..|...:.....|...|..|.|.||..|    :|..|..|.|     :
plant   420 LSSGQGDSSIPSPATSPRSFGTPISGLLILHWGKTLAGDRVRFFG----DELCPGLPTS-----R 475

  Fly   448 LPEYDKIVDQVVQELRMNLCLSADNSVMRQCNVLLAGASGTGKTVLVERILDQLSRK-------- 504
            .|.|..|                                  ||.:||  ..:..|.|        
plant   476 GPPYGFI----------------------------------GKVLLV--FDENPSAKVGVRFENP 504

  Fly   505 -PD------YCHFEFFHG---SRSKGRKTESIQKDLRNIFTSCL--------QHAPAIVVLENLD 551
             ||      .|  |..||   |.:..:...|...||..:..:.|        :..|.|:.|    
plant   505 VPDGVDLGQLC--EMGHGFFCSATDLQFESSASDDLNELLVTKLFEVAHDQSRTCPVIIFL---- 563

  Fly   552 VLAHAAGEQSSQDGEYY---NRMADTVYQLIVQYTTNNAIAV-------------IATVNELQTL 600
                       :|.|.|   |....:.::..::..::|.|.:             |..:.:|...
plant   564 -----------KDAEKYFVGNSHFCSAFKSKLEVISDNLIVICSQTHSDNPKEKGIGRLTDLFVN 617

  Fly   601 NKRLSSPRGRHVFQTVARLPNLERADREIILRELCSHINVA----------------KDLDLVKF 649
            ...:..|:|..:.::...  :|:|....:.::...:|:.:.                |||.|.:.
plant   618 KVTIYMPQGEELLKSWKY--HLDRDAETLKMKANYNHLRMVLGRCGIECEGIETLCMKDLTLRRD 680

  Fly   650 SNLTEGYRKCDLVQFVERAIFYA--YRISKTQP--------LLTNDQL---IESLEHTNSYCLQG 701
            |              .|:.|.:|  :.| |:.|        :|:.:.|   ||.||..:...|:.
plant   681 S--------------AEKIIGWALSHHI-KSNPGADPDVRVILSLESLKCGIELLEIESKKSLKD 730

  Fly   702 IQSNQRTGNDAD---ANEMRV--EELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQA-GVLLY 760
            |.: :.|...:|   .:|:.|  :::..||:|...|:|::|.|.::|.:|....|.... |:||:
plant   731 IVT-ENTFEISDIIPPSEIGVTFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLF 794

  Fly   761 GPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSL 825
            ||.|||||.|...:||.....:|::.    ::::..:.|:.|:.:|:.|....|.::|.||.:|:
plant   795 GPSGTGKTMLAKAVATEAGANLINMS----MSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESM 855

  Fly   826 APKRGHDSTGVTDRVVNQLLTELDGV--EGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLP 888
            ..:       ...:..|:.:...||:  ...:.|.|:|||:||..||.|::|  |:...:...||
plant   856 LHR-------YRLKTKNEFIINWDGLRTNEKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLP 911

  Fly   889 DAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQFGHEK 950
            ||.:|.:|.:.:.|...|....|.|..|..|..|:|.|::::..:|....:.|.:.:...|:
plant   912 DARSRSKILKVILSKEDLSPDFDIDEVASMTNGYSGNDLKNLCVTAARRRIIEIVEKEKSER 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729 5/28 (18%)
CDC48 365..983 CDD:273521 143/669 (21%)
RecA-like_PEX1_r2 728..885 CDD:410934 46/159 (29%)
AT1G62130NP_176404.3 FHA 93..193 CDD:469597
RPT1 705..1016 CDD:440835 78/283 (28%)
P-loop containing Nucleoside Triphosphate Hydrolases 754..908 CDD:476819 48/166 (29%)
Blue background indicates that the domain is not in the aligned region.

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