DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and AT4G24710

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_194202.4 Gene:AT4G24710 / 828573 AraportID:AT4G24710 Length:479 Species:Arabidopsis thaliana


Alignment Length:429 Identity:111/429 - (25%)
Similarity:179/429 - (41%) Gaps:93/429 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 NRMADTVYQLIVQYTTNNA-IAV---IATVNELQTL--NKRLSSPRGRHVFQTVARLPNLERADR 627
            |...:..||..::..|... |||   :||.|....|  ||.|.|........:.|||.:::||..
plant    22 NASMEVSYQNPIEAATIPVQIAVAEPVATPNPPPCLHENKFLVSVEVCLKPSSTARLEDVQRAVE 86

  Fly   628 EIILRELCSHIN-----VAKDLDLVKFSNLTEGYRK---CDLVQFVER---AIFYAYRISKTQPL 681
            .::.....|:.:     .|.||.||      :..::   ||..::|:.   .:|:     :.:|:
plant    87 RMLENRSMSYADGLVLIPADDLFLV------DNVQRICICDTEEWVKNNDVLLFW-----QVKPV 140

  Fly   682 LTNDQLIESLEHTNSYCLQGIQSNQRTGNDADANE--MRVEELPGL-ESVV---GVLEEVLMWPS 740
            :...||||. ......|..        |..|..||  :..:|..|| ||::   |:.:.:|    
plant   141 VHTFQLIEE-GPCEDLCAD--------GQPASFNEWILPAKEFDGLWESLIYESGLKQRLL---- 192

  Fly   741 RYPTIFNASPLRNQAGV-----------LLYGPPGTGKTYLVSQLATSWNLR---------IISV 785
            ||..   ::.|..|.||           ||:||||||||.|...||...::|         :|.|
plant   193 RYAA---SALLFTQKGVNPNLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEV 254

  Fly   786 KGPELLAKYIGQSEENVRNLFNRAR-----SARPCVLFFDEFDSLAPKRGHDSTGV----TDRVV 841
            ....|.:|:..:|.:.|..||.:.:     ......:..||.:|||..|....:|.    :.|||
plant   255 NAHSLFSKWFSESGKLVAKLFQKIQEMVEEDGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV 319

  Fly   842 NQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPDAPARVRIFEALSSTLSL 906
            |.|||::|.::....|.::..::....:|.|.:....|...|..|    ...|| :|.|.|    
plant   320 NALLTQMDKLKSAPNVIILTTSNITTAIDVAFVDRADIKAYVGPP----TLHVR-YEILRS---- 375

  Fly   907 DECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQ 945
              ||:.....|..:::.|.|..||   .:.:::||.|::
plant   376 --CVEELISKGIISSFQGCDGLSI---PSFSSLKEKLSE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 111/429 (26%)
RecA-like_PEX1_r2 728..885 CDD:410934 50/188 (27%)
AT4G24710NP_194202.4 RecA-like_Pch2-like 163..361 CDD:410916 56/204 (27%)
Blue background indicates that the domain is not in the aligned region.

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