Protein Alignment Pex1 and NSF

DIOPT Version :10

• Sequence 1: NP_652016.1
• Gene: Pex1 / 45460
• FlyBaseID: FBgn0013563
• Length: 1006
• Species: Drosophila melanogaster
• Sequence 2: NP_192400.2
• Gene: NSF / 825830
• AraportID: AT4G04910
• Length: 742
• Species: Arabidopsis thaliana
• Alignment Length: 446
• Identity: 131/446 - (29%)
• Similarity: 213/446 - (47%)
• Gaps: 90/446 - (20%)

  Fly   594 VNELQTLNKRLSSPRGRHVFQTVARLPNLERADREIILREL--CSHINVAKDLDLV--------K 648
            :|.:|..:.|:|:  |..|  :|:|....|..|..::..||  ......::.:|..        |
plant    71 LNAIQRRHARVST--GDMV--SVSRFVPPENFDLAMLTLELEFVKKGTKSEQVDAALLSTQLKRK 131

  Fly   649 FSN--LTEGYRKCDLVQFVERAIFYAYRISKTQPLLT-NDQLIESLEHTN----------SYCL- 699
            ::|  ||.|          ::|.|   ....|..:|| |...:|..:|||          :|.:
plant   132 YTNQVLTVG----------QKATF---EYHGTNYILTVNRADVEGQDHTNGIERGLLSKDTYIVF 183

  Fly   700 -----QGIQ-SNQR---TGNDADANEMRVEELPGLESVVGVLEEVL--MWPSRY--PTIFNASPL 751
                 .||: .|||   :.|.....|..:|.| |:..:.....::.  .:.||.  |.:.:...:
plant   184 EASNASGIKIVNQREAASSNIFKHKEFNLESL-GIGGLGAEFADIFRRAFASRVFPPHVTSRLGI 247

  Fly   752 RNQAGVLLYGPPGTGKTYLVSQLATSWNLRIIS-VKGPELLAKYIGQSEENVRNLFNRAR----- 810
            ::..|:||:||||||||.:..|:....|.:... |.|||:|:|::|::|:|||:||..|.
plant   248 KHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRT 312

  Fly   811 ---SARPCVLFFDEFDSLAPKRG--HDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLD 870
               ::...|:.|||.|::...||  .|.|||.|.:||||||::||||.|..|.:|..|:|.:|||
plant   313 LGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLD 377

  Fly   871 PALLRSGRIDRLVECPLPDAPARVRIFEA----------LSSTLSLDECVDFDWFAGKTANYTGA 925
            .||||.||::..||..|||...|::|.:.          |.:.::|.|      .|.:|.||:||
plant   378 EALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQE------LAARTKNYSGA 436

  Fly   926 DIQSILTSANMAAVKEALAQFGHEKLAK-----KISLKQKHLIESFQTTRPSLSAS 976
            :::.::.||...|:...|:.   :.|.|     .|.:..:..:.:....:|:..||
plant   437 ELEGVVKSATSYALNRQLSM---DDLTKPVEEENIKITMEDFLHAIYEVQPAFGAS 489

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pex1	NP_652016.1	PEX-1N	93..168	CDD:462729
		CDC48	365..983	CDD:273521	131/446 (29%)
		RecA-like_PEX1_r2	728..885	CDD:410934	67/171 (39%)
NSF	NP_192400.2	CDC48_N	12..92	CDD:215012	7/24 (29%)
		CDC48	60..641	CDD:273521	131/446 (29%)
		RecA-like_NSF-SEC18_r1-like	216..392	CDD:410912	68/175 (39%)