DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and pex1

DIOPT Version :9

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_004915478.1 Gene:pex1 / 779516 XenbaseID:XB-GENE-985415 Length:1269 Species:Xenopus tropicalis


Alignment Length:1249 Identity:314/1249 - (25%)
Similarity:522/1249 - (41%) Gaps:319/1249 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YASWAPQKGGGGIKDTEIGINARAAKEIGLHENDLVKCALIADVLNLRSVHVTPVSSKDWEIIEL 110
            |..|..::.|...:.....:|.:..:.:|..:...|......:|::.:.|.|.|:::.||:|:||
 Frog    52 YLCWMERRSGTCSRTNVAELNRQFGEILGFSDGQQVFLKQCTNVISCKEVTVEPLTADDWDILEL 116

  Fly   111 STEKISGSVLEQTRIVNSTQILIVWINKSMQVALTVDRLKPHMNYGRIDHNTELVVAP---NLYK 172
            .:..:...:|:|.|||....|..||::....:.|.:..|.|..:|||::..|||:|||   ||..
 Frog   117 HSSALESRLLDQIRIVYPKAIFPVWVDPHTCIYLQIGALTPQSSYGRLEPLTELIVAPKQRNLET 181

  Fly   173 GLTNGTSNGVIEENTKLSRSKT------TAQVKDELTE---KLTPLTHSSTVSNVKN-------- 220
            ........|..:.:...|..|:      ||..:.:.||   ..|...||.::|:.|:        
 Frog   182 ISPAFIPPGPEDLDVNFSHEKSDHKQSRTADSQRQSTEGESGPTESDHSDSLSSSKSIWDTVGDF 246

  Fly   221 ---TIQRNKR----QDHMERLKKDLRRESSRSFEFRVIRGLWR--EQAQESDVFVNGKHLPEFFD 276
               ::.|...    ....|.:||.|.::......|||...:..  :.:||.:.:.|...:..|  
 Frog   247 LLRSLGRKPALSLGSSETELIKKSLVKKVELEAVFRVSSRIPHIVKSSQEYNDYANDNCVHVF-- 309

  Fly   277 LDLFYCMHTAADKDYYVRVRTVEDDIE-------------------------------------- 303
              |:|........|..|...|:::.:.                                      
 Frog   310 --LWYPEPPGLVPDIVVTFGTIQELLSPKRRKESTRKNTEPSEKKPDGIAPGSPKQRNSDTKGHS 372

  Fly   304 ----------DDLPETIH---------------PS---IELNANLMKLLGIKELERVVLRPKTTV 340
                      |||.:.|.               ||   .:||.|:...:.|...:.|:..|.:..
 Frog   373 ATVKIVWHGFDDLKDVIEYDTRNGNTHVGKVWVPSQLRKKLNINISSAVRIHSHDSVLRLPTSLT 437

  Fly   341 VNFVEKIELFANKKTHYKIMENAFKRFVIERTQHK-PMLFNQEEVVR--LEDD------LLVTVG 396
            :...:.::    :..|...::.||..::...:..| |.:......::  |:|:      :|..:.
 Frog   438 LQPAQTLD----RNIHEDEIKAAFSTWLQSNSTLKMPWIAGNTGYIQIILKDEVSDFFIILDKLD 498

  Fly   397 ILPEHFRYCVVDAQFLKESKIYAADLVRPVGEIIKEETPPTSP-------------LSVQDLIQL 448
            :......:.::....::::||:           :..|..|:..             |.:|:|..:
 Frog   499 LQSSQDDFYMLCPSIMEKTKIH-----------VNFEPAPSEESHRHLHADQNLLYLKLQNLGGV 552

  Fly   449 PE-----YDKIVDQVV-QELRMNLCLSADNSVMRQCNVLLAGASGTGKTVLVERILDQLSRKPDY 507
            .:     ||.:|..:: :.|...|..||  |.:|...|||.|..|:||:.|.:.:..:.|.:.: 
 Frog   553 SKLGKSCYDHVVHCLLGRPLSRQLVASA--SGLRSGGVLLCGPKGSGKSTLAKALCKEASEQLE- 614

  Fly   508 CHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLAHAAG----EQS---SQDG 565
            .|.|.......||:..|:|.:.|...|.......|::::|::||.:|..|.    |||   :|..
 Frog   615 AHVEEIDCKLLKGKNVENIIQTLEEAFEEAAWRQPSVILLDDLDQIAGVASSPELEQSPEATQSK 679

  Fly   566 EYYNRMADTVYQLIVQYTTNNAIAVIATVNELQTLNKRLSSPRGRHVFQTVARLPNLERADREII 630
            :....:.|.:..:|   :.:..:::|||.....:||..|.|.:|.|:||.|..:|...:.:|..:
 Frog   680 QLAYVLKDLMKNII---SMDTLVSLIATCQSEHSLNPVLISEQGTHLFQCVKPIPPPTQENRSEM 741

  Fly   631 LR-----ELCSHINVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYRISKTQPLLTNDQLIES 690
            ||     .|.......:|||....:..|||:...|....|||||  ...:||.|.....|.::.:
 Frog   742 LRCVIENRLSGDTAFYRDLDFQYLARETEGFVARDFTMLVERAI--ESSVSKRQICRIEDLVLST 804

  Fly   691 LEHTNSYCLQGIQSNQRTGNDADANEMRVEE---LPGLESVVGVLEEVLMWPSRYPTIFNASPLR 752
            .:...:  |:|.  ...:..:|..::.:.::   :.||..:..||::.:..|::||.:|...|:|
 Frog   805 TDFQRA--LKGF--TPLSLRNAQLHKPKKQDWNMVGGLHDIRQVLKDTIELPAKYPELFANLPIR 865

  Fly   753 NQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVL 817
            :::||||||.||||||.|...:|....:..||:||||||:||||.||:.||::|.||::|:||:|
 Frog   866 HRSGVLLYGAPGTGKTLLAGVIAHESRMNFISIKGPELLSKYIGASEQAVRDVFTRAQAAKPCIL 930

  Fly   818 FFDEFDSLAPKRGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRL 882
            |||||||:||:||||:||||||||||:||:||||||||||.|:||||||:|:||||||.||:|..
 Frog   931 FFDEFDSIAPRRGHDNTGVTDRVVNQMLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDEC 995

  Fly   883 VECPLPDAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALA--- 944
            :.||.||..:|..|.:.||.::.|||.||....|..|..:||||::::|.:|.:.|:...|:   
 Frog   996 LYCPPPDQDSRFEILKGLSHSMLLDENVDLKHIASLTDYFTGADLKALLYNAQLEAIHTNLSVTV 1060

  Fly   945 -------------------------------------------------------------QFG- 947
                                                                         .|| 
 Frog  1061 PQDNNSGSDSDMSLSSIIFLNHSSASDDSGGDQDSVLDHSLPSLDMIKLPIEDIHSSMWRLYFGN 1125

  Fly   948 ----------------------------------------------------------------- 947
                                                                             
 Frog  1126 SYDSDLGNGSSEQTSQSFSGSNSITHEFTGPTIGELVPSQPLVFISSSPEDHQQHSQEQCQKVDD 1190

  Fly   948 ----------------HEKLAKKISL--KQKHLIESFQTTRPSLSASDVAKYHRTYARFTNKEKT 994
                            |.::..|.||  ||.||:.:..:||||:|..|...::..|..|.|.:::
 Frog  1191 EISVPKANCMNVVYDSHSQMESKKSLLIKQHHLLNALASTRPSISQEDWKFFNHLYENFKNPKQS 1255

  Fly   995 SREF--VAKRATLA 1006
            |||.  ..::.|||
 Frog  1256 SRETWRSGQKVTLA 1269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:286361 26/74 (35%)
SpoVK 479..974 CDD:223540 201/657 (31%)
P-loop_NTPase 480..604 CDD:304359 34/130 (26%)
AAA 757..887 CDD:278434 89/129 (69%)
pex1XP_004915478.1 PEX-2N 11..93 CDD:370393 6/40 (15%)
PEX-1N 99..174 CDD:370392 26/74 (35%)
CDC48 <587..1052 CDD:273521 185/474 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3218
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 427 1.000 Inparanoid score I1709
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1171861at2759
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 1 1.000 - - oto104714
Panther 1 1.100 - - LDO PTHR23077
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R902
SonicParanoid 1 1.000 - - X3465
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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