DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex1 and Fign

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_068362.1 Gene:Fign / 60344 MGIID:1890647 Length:759 Species:Mus musculus


Alignment Length:323 Identity:82/323 - (25%)
Similarity:146/323 - (45%) Gaps:51/323 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 TNDQLIESLEHTNSYCLQGIQSNQRTGNDADANEMRVE-------ELPGLESVVGVLEEVLMWPS 740
            :|..:.|.|::|:::.:           |...||:..:       ::.||:.|..|::|.::||.
Mouse   453 SNHSVDEQLKNTDTHLI-----------DLVTNEIITQGPPVDWSDIAGLDLVKAVIKEEVLWPV 506

  Fly   741 RYPTIFN---ASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENV 802
            .....|:   |.|    ..:||:||.|||||.|...:|:........:.|..|:||:||::|:.:
Mouse   507 LRSDAFSGLTALP----RSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWIGEAEKII 567

  Fly   803 RNLFNRARSARPCVLFFDEFDSLAPKRGHDSTGVTDRVVNQLLTELDGV--EGLQGVTVIAATSR 865
            ...|..||..:|.|:|..:.|.|...:..:......|:..:.|.:||.|  .....:.||.|||:
Mouse   568 HASFLVARCRQPSVIFVSDIDMLLSSQVSEEHSPVSRMRTEFLMQLDTVLTSAEDQIVVICATSK 632

  Fly   866 PELLDPALLRSGRIDRLVECPLPDAPARVRIFEALSSTLSLDECV---DFDWFAGKTANYTGADI 927
            ||.:|.: ||...:.||: .||||:.||.:|...|.:  ..:.|:   :|.....:|..::|.|:
Mouse   633 PEEIDES-LRRYFMKRLL-IPLPDSTARHQIIVQLLT--QHNYCLNDKEFALLVQRTEGFSGLDV 693

  Fly   928 QSILTSANMAAVKEALAQFGHEKLAKKIS---------LKQKHLIESFQTTRPSLSASDVAKY 981
            ..:...|.:..:        |...|..:|         :..:....:|...:||:|..::..|
Mouse   694 AHLCQEAAVGPL--------HAMPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQKELDMY 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 82/323 (25%)
RecA-like_PEX1_r2 728..885 CDD:410934 51/161 (32%)
FignNP_068362.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..111
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..237
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..293
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..429
RecA-like_fidgetin 487..650 CDD:410931 53/168 (32%)
AAA_lid_3 675..>706 CDD:465537 5/38 (13%)
Vps4_C <723..756 CDD:462762 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.