DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and drc11

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_073809094.1 Gene:drc11 / 553364 ZFINID:ZDB-GENE-050208-768 Length:846 Species:Danio rerio


Alignment Length:836 Identity:159/836 - (19%)
Similarity:262/836 - (31%) Gaps:279/836 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 YVRVRTVEDDIEDDLPETIHPSIELNANLMKLLGIKELERVVLRPKTTVVNFVEKIELFANKKTH 356
            |.|:........:||.|..:|::||...       |:..:|.   :|....|:..:::|...:..
Zfish     6 YGRMLDAAQGALEDLLEDEYPTLELRPQ-------KDRLQVF---QTLATFFLRYMKIFRALEEV 60

  Fly   357 YKIMENAFKRFVIERTQHKPM---LFNQEEVVRLE-------DDLLVTVGILPEHF-----RYCV 406
            |..:.:..||.|:.:.....|   :..:.|:|.||       ||||....:.||..     ||.|
Zfish    61 YDQIVHPQKRRVVHQVLDGVMGRLVELKNEMVELEHSEFHYFDDLLQDFKMTPEDLEVPIPRYFV 125

  Fly   407 VD-AQFLKESKIYAADLVRPVGEIIKEETP-------PTSPLSVQDLIQLPEYDKIVDQVVQELR 463
            .: .:.|||.:...|.:      :.||..|       |...:|::..:.|.:..:...|  ..||
Zfish   126 REKMRALKEREKMLAHV------LAKEGRPEHKSVNRPVLSMSMERAVWLLQVSERARQ--GRLR 182

  Fly   464 MNLCLSADNSVMRQCNVLLAGASGTGKTVLVE---RILDQLSRKPDY---CHFEFFHGSRSKGRK 522
            .:..                      ||:.:|   |.|......||.   |..:.:.|.|.:.|.
Zfish   183 AHFM----------------------KTIRLEEQRRHLGSSMLDPDQAATCIQKVWRGYRDRRRV 225

  Fly   523 TESIQKDLRNIFTSCL---QHAPAIVVLENLDVLAHAAGEQSSQDGEYYNRMAD------TV--- 575
            .:...:::  ||...:   |..|:...|....|.......|...:.||...:.:      ||   
Zfish   226 NKECLEEM--IFLGMIPAQQQTPSPAQLRAQQVERRRHIIQEEHEAEYQTALVNIKESVRTVDGA 288

  Fly   576 -----------------------------------YQLIVQYTTNNAIAVIATVNELQTLNKRLS 605
                                               ..:..|.|.....|..|...|.:...|:|.
Zfish   289 DIKESLQEQIRQWFLECRDASGKFPDFPSPEDGGSASIFAQKTPEQVAAEFAAKEEEREKKKKLK 353

  Fly   606 S----------------PRG--------------------------------RHVFQTVARLPN- 621
            |                |:|                                :.|:|......| 
Zfish   354 SEKDKKANDRKEKKKGKPKGKGGKGDTEEEETGWKMTPSNFLPTVFEGAKLYKEVWQNRDEQQNF 418

  Fly   622 LERADREIILRELCSHINV-------------AKDLDLV-------------------KFSNLTE 654
            |:|.|.:::..|....:.|             .|:|.||                   |......
Zfish   419 LQRFDAQLVREEKRLEVEVELRVQVDELMRQELKNLKLVVDRDKGKKKKKVKKSSKKKKKKGRKT 483

  Fly   655 GYRKCDLVQFVERAIFYAYRISKTQPLLTNDQLIESL-------------------EHTNSYCLQ 700
            |.:|                 .|.:..||.|:.||||                   ::...|...
Zfish   484 GKKK-----------------KKKEKDLTADRTIESLYEELVLEGIIIRPMNVKLSDYIGEYSYL 531

  Fly   701 GIQSNQRTGNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQA---------G 756
            |....|     ||     :|.:|.|..|..::           .::...||.:|.         .
Zfish   532 GTTLRQ-----AD-----IEPMPSLSDVRQLI-----------ALYGILPLGSQCVHERGPLIRA 575

  Fly   757 VLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQS--EENVRNLFNRARSARPCVLFF 819
            :||.||.|.||..||..|.|.....:.::....|..||.|:|  :..:..:|..||..:|.|::.
Zfish   576 LLLTGPQGVGKKMLVHALCTETGANLFNLSPSTLAGKYPGKSGLQLLLHMVFKVARQLQPSVIWI 640

  Fly   820 DE----FDSLAPKRGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRI- 879
            .:    |....||...:..  ..|:...|...|..::....|.|:..:.||  .|..:....:: 
Zfish   641 GDAEKTFYKKVPKLEKEME--PKRLKKTLPKILKSIKAEDRVLVVGTSRRP--FDADIKPFCKVY 701

  Fly   880 DRLVECPLPDAPARVRIFEAL--SSTLSLDECVDFDWFAGKTANYT-GADIQSILT 932
            .:::..|.||..:|..:::.|  :....||..:|....|..|..|| |..:|:|.|
Zfish   702 KKIILIPRPDYASRFTLWKELLQAHGALLDPKLDLSSLAKVTDGYTQGHILQAIQT 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 145/763 (19%)
RecA-like_PEX1_r2 728..885 CDD:410934 36/172 (21%)
drc11XP_073809094.1 None
Blue background indicates that the domain is not in the aligned region.

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