DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex1 and FIGN

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_047300819.1 Gene:FIGN / 55137 HGNCID:13285 Length:785 Species:Homo sapiens


Alignment Length:317 Identity:84/317 - (26%)
Similarity:149/317 - (47%) Gaps:39/317 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 TNDQLIESLEHTNSYCLQGIQSNQRT-GNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIF 746
            :|..:.|.|::|:::.:..:.:...| |...|.|     ::.||:.|..|::|.::||......|
Human   479 SNHSVDEQLKNTDTHLIDLVTNEIITQGPPVDWN-----DIAGLDLVKAVIKEEVLWPVLRSDAF 538

  Fly   747 N---ASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNR 808
            :   |.|    ..:||:||.|||||.|...:|:........:.|..|:||::|::|:.:...|..
Human   539 SGLTALP----RSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLV 599

  Fly   809 ARSARPCVLFFDEFDSLAPKRGHDSTGVTDRVVNQLLTELDGV--EGLQGVTVIAATSRPELLDP 871
            ||..:|.|:|..:.|.|...:.::......|:..:.|.:||.|  .....:.||.|||:||.:|.
Human   600 ARCRQPSVIFVSDIDMLLSSQVNEEHSPVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDE 664

  Fly   872 ALLRSGRIDRLVECPLPDAPARVRIFEALSSTLSLDECV---DFDWFAGKTANYTGADIQSILTS 933
            : ||...:.||: .||||:.||.:|...|.|  ..:.|:   :|.....:|..::|.|:..:   
Human   665 S-LRRYFMKRLL-IPLPDSTARHQIIVQLLS--QHNYCLNDKEFALLVQRTEGFSGLDVAHL--- 722

  Fly   934 ANMAAVKEALAQFGHEKLAKKIS---------LKQKHLIESFQTTRPSLSASDVAKY 981
                 .:||:....|...|..:|         :..:....:|...:||:|..::..|
Human   723 -----CQEAVVGPLHAMPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQKELDMY 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 84/317 (26%)
RecA-like_PEX1_r2 728..885 CDD:410934 50/161 (31%)
FIGNXP_047300819.1 RecA-like_fidgetin 513..676 CDD:410931 52/168 (31%)
AAA_lid_3 701..>732 CDD:465537 6/38 (16%)
Vps4_C <749..782 CDD:462762 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.