DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and ATAD2B

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_047300755.1 Gene:ATAD2B / 54454 HGNCID:29230 Length:1522 Species:Homo sapiens


Alignment Length:579 Identity:135/579 - (23%)
Similarity:225/579 - (38%) Gaps:144/579 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 CLSADNSVMRQCNVLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGSRSKGRKTESIQKDLR 531
            |::.|..|.:.|                                      ||:..:.||:.:.| 
Human   158 CINGDMEVRKSC--------------------------------------RSRKNRFESVNQSL- 183

  Fly   532 NIFTSCLQHAPAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLIVQYTTNNAIAVIATVNE 596
             :|.. |.::.|..||:.:|.: :....:.|.:.|......||.::.:..|:        .....
Human   184 -LFDQ-LVNSTAEAVLQEMDNI-NIRRNRRSGEVERLRMWTDTEFENMDMYS--------RVKRR 237

  Fly   597 LQTLNKRLSSPRGRHVFQTVARLPNLERADREIILRELCS-------HINVAKDLDLVKFSNLTE 654
            .::|.:.....:..|...|.......:..|.:|.:.|...       ::...|.:|..:...:..
Human   238 RKSLRRNSYGIQNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPPIVP 302

  Fly   655 GYRKCDLVQFVERAIFYAYR--------------ISKTQPLLTNDQLIE-----SLEHTNSYCL- 699
            .::|..     |..:|..:|              |..:....::::..|     |:....:.|| 
Human   303 AHQKKR-----ENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEERFERRKSKSMARARNRCLP 362

  Fly   700 ---------QGI-QSNQRTGND-ADANEM------RVEELPGLESVVGVLEEVLMWPSRYPTIFN 747
                     .|| :...:.|.. ||.:.|      |.:.:.||...:..|:|::::|..||.||.
Human   363 MNFRAEDLASGILRERVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFE 427

  Fly   748 ASPLRNQAGVLLYGPPGTGKTYLVSQLATSWN-----LRIISVKGPELLAKYIGQSEENVRNLFN 807
            ...::...|.|.|||||||||.:...||...:     :.....||.:.|:|::|:||..:|.||:
Human   428 KFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFD 492

  Fly   808 RARSARPCVLFFDEFDSLAPKRGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPA 872
            :|...||.::||||.|.|||.|......:...:|:.||..:||::....:.||.||:|.:.:|||
Human   493 QAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPA 557

  Fly   873 LLRSGRIDRLVECPLPDAPARVRIFEALSSTLSLDECVDFDW-----------FAGKTANYTGAD 926
            |.|.||.||.....|||..||..|.:..:.          ||           .|.|...|.|||
Human   558 LRRPGRFDREFLFNLPDQKARKHILQIHTR----------DWNPKLSDAFLGELAEKCVGYCGAD 612

  Fly   927 IQSILTSANMAAVKEALAQF---GHEKLAKKISLKQKHLIESFQTTRPSLSASDVAKYH 982
            |:::.|.|.:.|::....|.   .|     |:.|....::         |||.|.  ||
Human   613 IKALCTEAALIALRRRYPQIYASSH-----KLQLDVSSIV---------LSAQDF--YH 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 135/579 (23%)
RecA-like_PEX1_r2 728..885 CDD:410934 61/161 (38%)
ATAD2BXP_047300755.1 RecA-like_Yta7-like 401..570 CDD:410925 63/168 (38%)
AAA_lid_3 595..635 CDD:465537 11/39 (28%)
P-loop containing Nucleoside Triphosphate Hydrolases 759..895 CDD:476819
COG5076 852..>1081 CDD:227408
Bromo_AAA 960..1066 CDD:99957
Blue background indicates that the domain is not in the aligned region.

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