DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex1 and LOC4397685

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:XP_001230510.2 Gene:LOC4397685 / 4397685 VectorBaseID:AGAMI1_013526 Length:826 Species:Anopheles gambiae


Alignment Length:759 Identity:195/759 - (25%)
Similarity:342/759 - (45%) Gaps:110/759 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 VIRGLWR-EQAQESDVFVNGKHLPEFFDLDLFYCMHTAADKDYYVRVRTVEDDIEDDLPETIHPS 313
            |.|.||. |....:.||...  |.||.|:         :.|:....|.|::..:||  .|.|...
Mosquito   154 VARTLWPVEDRHGAKVFFEA--LDEFNDV---------SAKELNATVTTLDGRLED--AEEIFLR 205

  Fly   314 IE--LNANLMKLLGIKELERVVLRPKTTVVNFVEKIELFANKKTHYKIMENAFKRFVIER--TQH 374
            :|  ..|||....|     :.:|   |::...::...:.:|......:....| ||:::.  |..
Mosquito   206 LEDPTQANLFAKNG-----KFLL---TSLKYQLQGCAIISNNPLSLTVCNKRF-RFLVDHAVTTE 261

  Fly   375 KPMLFNQEEVVRLEDDLLVTVGILPEHFRYCVVD----AQFLKESKIYAADLVRPVGEIIKEETP 435
            ...|.:|...:.|:|.|.|.:    ...:..::|    ||...:.::|:                
Mosquito   262 GNDLTDQLNKMSLKDRLYVIL----RTTKLTLLDDSKAAQHSHQQRMYS---------------- 306

  Fly   436 PTSPLSVQDLIQLPEYDKIVDQVVQELRMNLCLSADNSVMRQCN--VLLAGASGTGKTVLVERIL 498
                     |..:...|..:.::.:.|.|...:.:..:.:...:  :||:|.||.|||:||..:.
Mosquito   307 ---------LTNIGGLDTTIAELKELLEMAFGMDSKQTTVGPVSRGILLSGVSGVGKTMLVNALA 362

  Fly   499 DQLSRKPDYCHF------EFFHGSRSKGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLA--H 555
            ...     :||.      |.|  |:..|....::.:....:|.  :...||:||:|.|..|.  .
Mosquito   363 THY-----HCHVVRLNCSEVF--SKFYGESEANVSRQFAEVFD--VHPKPAMVVVEELHNLCPKS 418

  Fly   556 AAGEQSSQDGEYYNRMADTVYQLIVQYTTNNAIAVIATVNELQTLNKRLSSPRGRHVFQTVARLP 620
            .|.:...:..:::..:.|:::..:    ..|...||.|.:.:..:|..|.. .||..::....:|
Mosquito   419 TATDIVKRISQHFLTLLDSLHANV----RGNRTVVIGTTDSVDNVNPLLRR-GGRMDYEFELPVP 478

  Fly   621 N-LERADREIILRELCSHINVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYRISKTQPLLTN 684
            : :.||  .|:.|.|..|.....:.|:...:.:|.||...||...|.:|...|    .|...:..
Mosquito   479 DAIARA--AILERVLSRHGQTVPEEDIRAVARITHGYVGADLENLVSKAASSA----PTGKPIDG 537

  Fly   685 DQLIESLEHTNSYCLQGIQSNQRTGNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNAS 749
            ..|:.:|:|.....::.|.        .:...:|..::.|.:.:...|.:::.||..:|.:|...
Mosquito   538 PALMAALQHVKPSAMREIM--------IECPNVRWTDIGGQDELKLKLRQIIDWPIHHPELFERL 594

  Fly   750 PLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARP 814
            .::...|:|::||||..||.:...:||...|..:|:||.||.:.::|:||..||:||.|||...|
Mosquito   595 GIKPPRGLLMFGPPGCSKTMIAKAIATESRLNFLSIKGSELFSMWVGESERAVRDLFRRARQVAP 659

  Fly   815 CVLFFDEFDSLAPKRGHDS-TGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGR 878
            .::||||.|::..:|..:| :.|.:||:.|||||:|||.||:.|.::|||:||:|:|.||:|.||
Mosquito   660 SIIFFDEIDAIGGERSAESGSSVKERVLAQLLTEMDGVSGLKDVRIVAATNRPDLIDRALMRPGR 724

  Fly   879 IDRLVECPLPDAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEAL 943
            :||:|...||||.||..||.....|:.....||......:||..:|::|::|   ...||:|...
Mosquito   725 LDRIVYVRLPDAAAREEIFHIKLKTIPTASTVDLAELVRRTAGCSGSEIEAI---CQEAALKGLE 786

  Fly   944 AQFGHEKLAKKISLKQKHLIESFQTTRPSLSASDVAKYHRTYAR 987
            :.|..|      :::.:|...:....||..| .::.:.:..|.:
Mosquito   787 SSFDVE------TIEWEHFEHALGVVRPRTS-PELLRLYEEYLK 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 167/635 (26%)
RecA-like_PEX1_r2 728..885 CDD:410934 68/157 (43%)
LOC4397685XP_001230510.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.