DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex1 and CG14183

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster


Alignment Length:1063 Identity:192/1063 - (18%)
Similarity:357/1063 - (33%) Gaps:349/1063 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KEIGLHENDLVKCALIADVLNLRSVHVTPVSSKDWEIIELSTEKISGSVLEQTRIVNSTQILI-- 133
            |:|...|...|...:.|::..|....|..:|     .|..:|.::....|.:..:.|:||.|:  
  Fly    28 KKIEPPEEKAVSYKIYAELYVLYVELVNKLS-----FIYHNTFQVQKRALVRVLVENATQQLMQL 87

  Fly   134 ------------VWINKSMQVALTVDRLKPHMNYGRIDHNTELVV--APN-LYK---GLTNGTSN 180
                        ::|:|    ||...:|.|.          :|||  :|. ||:   .:.|    
  Fly    88 KEELKDLEMSEYIYIDK----ALIARKLTPR----------DLVVWRSPQFLYRRPLDIQN---- 134

  Fly   181 GVIEENTKLSRSKTTAQVKDELTEKLTPLTHSSTVSNVKNTIQR------NKRQDHMERLKKDLR 239
             :|.:|......:   :.:::..:...|::.:..:.......:|      |.:.|..:.||...|
  Fly   135 -IIADNRLYMNDE---EKEEKAAQDWVPISEAVKLIQAHERARRARVYKSNIKYDKKKFLKVHQR 195

  Fly   240 RESSRSFEFRVIRGLWREQAQESDVFVNGKHLPEFFDLDLFYCMHTAADK--DYYVRVRTVEDDI 302
            ::.:..|.|:      .:||....|           ...:|......||:  :..::...|.|..
  Fly   196 KKINYKFTFK------PDQAMSIPV-----------KRTIFSADFLKADESCENLIKKDDVADTA 243

  Fly   303 EDDLPETIHPSIELNA--------------NLMK--------LLGIKELERVVLRPKTTVVNFVE 345
            .||  |....:|:.||              .::|        |.|:|:: |.:.||..|..:.  
  Fly   244 IDD--EEALSAIQNNAACKIQSCWRGYKTRKIVKIRKRFKEELYGMKKI-RKLKRPNQTANSI-- 303

  Fly   346 KIELFANKKTHYKIMENAFKRFVIERTQHKPMLFNQEEVVRLEDDLLVTVGILPEHFRYCVVDAQ 410
             :|::.|:....|:.|:.......|||:    |........:||        :.:|.|      .
  Fly   304 -MEMYKNEMLKKKLDEDFINLINDERTR----LLQFRSPWMMED--------ISDHIR------A 349

  Fly   411 FLKESKIYAA--------DLVR--PVGEIIKEETPP--------TSPLSVQDLIQLPEYDK---- 453
            :.||  .|.|        |.|:  .|..:|.|...|        ..|||..:|.:|.:.:|    
  Fly   350 WFKE--FYDATGNFHPYPDPVKQGTVLVVIDETMTPMEFQESLGKKPLSKAELKKLRDKEKKEKR 412

  Fly   454 IVDQVVQELRMNLCLSADNSVMRQCNVLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGSRS 518
            ...:.:::|:|       ....|:..:..||....|..:...:.::.:.                
  Fly   413 KKKEKLKQLKM-------KEAKRRKKLRDAGVIDIGYELTASKAIENIE---------------- 454

  Fly   519 KGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLIVQYT 583
              ...:...||.||:                               .||.|:..|.:.:.:    
  Fly   455 --ETMKKYSKDWRNV-------------------------------DEYLNKNHDPIKEWV---- 482

  Fly   584 TNNAIAVIATVNELQTLNKRLSSPRGRHVFQTVARLPNLERADREIILRELCSHINVAKDLD--- 645
                     |..:|..:::.:   ||        .:....|.:.| :|||.     :|||.|   
  Fly   483 ---------TEEQLAKIHQEV---RG--------LVDEYMRVEYE-LLREA-----LAKDNDEKY 521

  Fly   646 ---LVKFSNLTEGYRKCDLVQFVERAIFYAYRISKTQPLLTNDQLIESLEHTNSYCLQGIQSNQR 707
               .||:....:..||                  |....:|.|:.:|||.:.    |:.....:.
  Fly   522 KALKVKYPKKKKEKRK------------------KKPKDMTGDRTLESLYNE----LKDAGIIEE 564

  Fly   708 TGN-DAD---------ANEMRVEE-----LPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGV 757
            .|: |.|         |::.|.|:     .|....:..|::|.::....:       .:.....:
  Fly   565 IGHRDFDEFITDFNFVADDTRDEDGLTTLGPAKGDIKMVIQESMLGMGEF-------DVPKPKSL 622

  Fly   758 LLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEF 822
            ||.||..:||..|...:|:..:...::: .||...||....:..:..:...|::.:|.:::.:|.
  Fly   623 LLIGPLNSGKRLLCEIIASELDAVFMNL-SPENTYKYAKDLKYFLHVILKVAKAFQPTIMYIEEA 686

  Fly   823 DSLAPKRGHDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRI-------D 880
            ..|..|:                           |...|....|.||..:|  :.:|       |
  Fly   687 HRLFWKK---------------------------VPPEAVEINPRLLGTSL--ASKILKPLKKND 722

  Fly   881 RLVECPLPDAP--ARVRIFEALSSTLSLDECVDFD-----WFAGKTAN-------YTGADIQSIL 931
            ::|.....:.|  |...|..|....|.:.:| |:.     |....|.|       |..:.:..:|
  Fly   723 KIVLVGTSNMPWAANGGIKRAFQKVLLIPKC-DYGTSFLLWLELMTENAPDDMKEYAYSALARVL 786

  Fly   932 TSANMA----AVKEALAQFGHEKLAKKISLKQKHL-----IESF-QTTRPSLSASD---VAKYHR 983
            .:.|..    .|||.|      .:.:|:.||.:.|     :|.| ....|.:...|   :.|:::
  Fly   787 QAYNSGDIDDNVKETL------NIDRKMRLKNEALDPNEFLEYFLSKNEPPIFPPDEKIMDKFNK 845

  Fly   984 TYARFTNKEKTSREFVAKRATLA 1006
            .:......||..:.::|::...|
  Fly   846 WFGSSNKLEKLRKSYMAQKLAKA 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729 18/90 (20%)
CDC48 365..983 CDD:273521 123/694 (18%)
RecA-like_PEX1_r2 728..885 CDD:410934 28/163 (17%)
CG14183NP_649172.3 Adgb_C_mid-like <201..>278 CDD:412094 17/95 (18%)
globin helix H 201..232 CDD:412094 8/47 (17%)
IQCD 247..278 CDD:467745 5/30 (17%)
IQ motif 259..277 CDD:412094 1/17 (6%)
P-loop containing Nucleoside Triphosphate Hydrolases 617..750 CDD:476819 31/162 (19%)

Return to query results.
Submit another query.