DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and Pex6

DIOPT Version :9

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_001027403.2 Gene:Pex6 / 3772165 FlyBaseID:FBgn0033564 Length:899 Species:Drosophila melanogaster


Alignment Length:919 Identity:217/919 - (23%)
Similarity:385/919 - (41%) Gaps:237/919 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 LTPLTHSSTVSNVKNTIQRNKRQDHMERLKKDLRRESSRSFEFRVIRGLWREQAQESDV-FVN-- 267
            |||:.:......:||           |::|.:....:|:.        ::...|:..|| |||  
  Fly    82 LTPIPNRLYDLLIKN-----------EQIKSEHLVFASQE--------VYENYAESPDVNFVNLV 127

  Fly   268 --------GKHLPEFFDLDLFYCMHTAADKDYYVRVRTVEDDIEDDLPET----IHPSIELNANL 320
                    ||.|              |:|:..  ..:||...:..:.|.|    |.|:.:...| 
  Fly   128 IRGRRVRIGKPL--------------ASDEGN--MTQTVIKQMLQEAPHTIVAQILPAAQCQPN- 175

  Fly   321 MKLLGIKE------LERVVLRPKTTVVNFVEKIELFANKKT--------HYKIMENAFK------ 365
              .|.::|      |:|..:|....|     ::|.||:::|        |..::.:..:      
  Fly   176 --CLYVQENFYGNILDRFQIRSNCWV-----QVEHFADEQTIPGIATKAHVYLVADPHELPAELT 233

  Fly   366 RFVIERTQHKPMLFNQEEVVRLE--DDLLVTVG-----ILPEHFRYCVVDAQFLKESKIYAADLV 423
            ..::....:.|.|.::....|:|  .:|:.|..     ::..|.|:..:....| |:|....:|.
  Fly   234 EVILSNYFNTPRLMHRGHTYRIEVNAELVGTATYAHYYLIFAHLRHVHLKCIHL-ETKGSEFELQ 297

  Fly   424 RPVGEIIKEETPPTSPLSVQDLIQLP-EYDKIVDQVVQEL------------------------- 462
            ..|.:            :..:|:|:| .:..:..||:..:                         
  Fly   298 AIVAK------------NFSNLVQVPASHSFLPRQVLDSMAIVENYPSGLRKPYKLLRSSVDAFL 350

  Fly   463 -RMNLCLSADN--SVMRQCNVLLAGASGTGKTVLVERILDQLSRKPDYCHFEFFHGSRSKGRKTE 524
             :.:.|||:.:  .|.     ||.|..|:||:.||..:..:|             |....|....
  Fly   351 PKKSACLSSKHIFPVF-----LLQGERGSGKSKLVSAVAQEL-------------GMHIYGADCA 397

  Fly   525 SI--------QKDLRNIFTSCLQHAPAIVVLENLDVLAHAAGEQSSQD-----------GEYYNR 570
            .|        :..|:.:|.......|.::...|.::.  ....:.::|           .|.:||
  Fly   398 EIVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFEIF--GIDNEGNEDLRLLSAFHVQVQELFNR 460

  Fly   571 MADTVYQLIVQYTTNNAI-------AVIATVN-ELQTLNKRLSSPRGRHVFQT----------VA 617
              |..:.::|...|::..       ..:..:| ::.:..:|....|..||.:|          :.
  Fly   461 --DRKHPIVVVALTSDRHLKPMIQGLFLEIINIDMPSKEERFEILRWMHVRETFNDIIYNQKAIE 523

  Fly   618 RLPNLERADREIILRELC----SHINVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYRISKT 678
            :||...|.::...:..:.    ..:||.:|:     :..::|:...||....:.|:....|....
  Fly   524 QLPLFSRENQSQFMPRISPSWRETLNVLQDV-----AAKSQGFLLGDLQLLYDNAVRMKIRNRLG 583

  Fly   679 QPLLTNDQLIESLEHTNSYCLQGIQSNQRTGNDADANEMRVEELP--------GLESVVGVLEEV 735
            :..|......::|....|               :.|:.:...::|        ||..:...::..
  Fly   584 RTTLDMSHFAKNLTDMQS---------------SFADSLGAPKVPKVYWSDIGGLAKLKDEIQSS 633

  Fly   736 LMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEE 800
            :..|.::..:...: || ::|:|||||||||||.:...:||..||..:||:|||||..|:||||:
  Fly   634 IGLPLKHVHLMGKN-LR-RSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQ 696

  Fly   801 NVRNLFNRARSARPCVLFFDEFDSLAPKRG--HDSTGVTDRVVNQLLTELDGV---EGLQGVTVI 860
            |||.:|:|||||.|||||.||.|||||.||  .||.||.||||:|||.|:||:   :..:.:.::
  Fly   697 NVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFIL 761

  Fly   861 AATSRPELLDPALLRSGRIDRLVEC-PLPDAPARVRIFEALSSTLSLDECVDFDWFAGK-TANYT 923
            |||:||:|:||||||.||.|:|... |...|..:..:..|.:...:||..||.:..|.: .:..:
  Fly   762 AATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMS 826

  Fly   924 GADIQSILTSANMAAVKEALAQFGH--------EKLAKKISLKQKHLIESFQTTRPSLSASDVAK 980
            |||:.||.::|.::||:..:.  ||        |.:.:.:.::::...:||....||:||.|:..
  Fly   827 GADLYSICSNAWLSAVRRTID--GHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKDLEY 889

  Fly   981 YHRTYARFT 989
            ::...|.::
  Fly   890 FNNLKASYS 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:286361
SpoVK 479..974 CDD:223540 154/558 (28%)
P-loop_NTPase 480..604 CDD:304359 24/150 (16%)
AAA 757..887 CDD:278434 80/135 (59%)
Pex6NP_001027403.2 SpoVK 367..847 CDD:223540 147/518 (28%)
P-loop_NTPase 367..492 CDD:304359 24/141 (17%)
AAA 653..787 CDD:278434 80/133 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23077
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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