DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex1 and atad1a

DIOPT Version :10

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_001004640.1 Gene:atad1a / 368672 ZFINID:ZDB-GENE-030616-593 Length:380 Species:Danio rerio


Alignment Length:357 Identity:94/357 - (26%)
Similarity:177/357 - (49%) Gaps:29/357 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 REIILRELCSHINVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYRISKTQPLLTNDQLIESL 691
            |:.:||.|..:..|...:.|..|...|  |..   :::|..|:....: .|:|.....:||::.:
Zfish     7 RDALLRPLTRNEVVGMLVRLTVFGAAT--YYS---IKWVVDALDPTQK-QKSQAKKRAEQLMKQI 65

  Fly   692 EHTNSYCLQGIQSNQRTGNDA----DANEMRV--EELPGLESVVGVLEEVLMWPSRYPTIFNASP 750
            .      ::|:...:...|.|    |...::|  .::.||:.::..:::.::.|.:...:|:.|.
Zfish    66 G------VEGVSLTEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSK 124

  Fly   751 -LRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARP 814
             |:...|||||||||.|||.:....|.:...|.|:::...|..|:.|:|::....:|:.|...:|
Zfish   125 LLQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQP 189

  Fly   815 CVLFFDEFDSLAPKRG---HDSTGVTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRS 876
            |::|.||.||....|.   |::|.:.......|...||..|..| |.|:.||:||:.:|.|:|| 
Zfish   190 CIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQ-VMVMGATNRPQDVDAAILR- 252

  Fly   877 GRIDRLVECPLPDAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKE 941
             |:.......||:|..|..|...:.|..:|...::....|.::..|:|:|::.:...|.|..|::
Zfish   253 -RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRD 316

  Fly   942 ALAQFGHEKLAKKISL--KQKHLIESFQTTRP 971
            .:.:...:::|::..|  :::| ::|.| .||
Zfish   317 YVRKQQMKQIAQQFQLDEEEEH-VDSRQ-LRP 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:462729
CDC48 365..983 CDD:273521 94/357 (26%)
RecA-like_PEX1_r2 728..885 CDD:410934 51/160 (32%)
atad1aNP_001004640.1 SpoVK 1..343 CDD:440232 91/351 (26%)
RecA-like_ATAD1 95..260 CDD:410928 53/167 (32%)
Blue background indicates that the domain is not in the aligned region.

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