DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex1 and CG5776

DIOPT Version :9

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_001260420.1 Gene:CG5776 / 34680 FlyBaseID:FBgn0032450 Length:799 Species:Drosophila melanogaster


Alignment Length:637 Identity:162/637 - (25%)
Similarity:291/637 - (45%) Gaps:123/637 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 KRFVIERTQHKPML-----FNQEEVVRLE------DDLLVTVGILPEHFRYCVVDA---QFLKES 415
            ||.::.|..:|..|     ||:....|||      ::.|..:.:          |:   ||::.:
  Fly   190 KRDMVNRVFYKDSLIHMNFFNKSLTFRLERWQSTVEEALAGLSL----------DSKPLQFIQVT 244

  Fly   416 KIYAADLVRPVGEIIKEETPPTSPLSVQDLIQLPEYDKIVDQVVQELRMNLCLSADNSVMRQCNV 480
            .:....|:.......:||...:..::...:..|....::|::.::.......|.|...|.|  .:
  Fly   245 NVTKLHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESMEYALGFRTLPAGLRVSR--GL 307

  Fly   481 LLAGASGTGKTVLVERILDQLSRKPDYCHFEFFH------GSRSKGRKTESIQKDLRNIFTSCLQ 539
            ||.||:|.||::::|.:. .::.:....|.:...      .|:..|   |:.|| |..||.....
  Fly   308 LLYGATGCGKSMVLEAMC-AVAEERSQGHVQLIRINSGEVYSKFLG---ETEQK-LGAIFERAYN 367

  Fly   540 H--APAIVVLENLDVLAHAAGEQSSQDGEYYNRMADTVYQLIVQYTTNNAIA-----VIATVNEL 597
            |  .|.::::|::..|.     ...::.:...|::.....|:.|.::.:.:.     |:||.:::
  Fly   368 HYPHPTLLLIEDVHNLC-----PKQENSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQI 427

  Fly   598 QTLNKRLSSPRGRHVFQTVARLPNLERA---DREI------------ILRELCSHI-NVAKDLDL 646
            .||:                  |::.||   |.|:            |:|.|...: :...|.::
  Fly   428 DTLH------------------PSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEV 474

  Fly   647 VKFSNLTEGYRKCDLVQFVERAIFYAY-----------RISKTQPLLTNDQLIESLEHTNSYCLQ 700
            ...:::|.||...||...|..|:..|.           .:::.:|....:.|||        |  
  Fly   475 EHVASITHGYVGADLANLVYAAMLQAQPNPLQMPHLQAALTRIKPSAMREVLIE--------C-- 529

  Fly   701 GIQSNQRTGNDADANEMRVEELPGLESVVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGT 765
               .|.:..:....:|:|:           .:::.:.||..:...|....::...|:|::||||.
  Fly   530 ---PNVQWSDIGGQSELRL-----------AMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGC 580

  Fly   766 GKTYLVSQLATSWNLRIISVKGPELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRG 830
            .||.:...|||...|..:|:|||||.:.::|:||..||.:|.:||...|.::||||.|::..:|.
  Fly   581 SKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERS 645

  Fly   831 H---DSTG--VTDRVVNQLLTELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPDA 890
            .   .|:|  |.:||:.||||||||||.||.||::|||:||:::|.||||.|||||::...||..
  Fly   646 EGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQC 710

  Fly   891 PARVRIFEALSSTLSLDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEA 942
            .||..|.:.....:.:...||.:.....|..|:||:||::...|.:.|::::
  Fly   711 EARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQS 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:286361
SpoVK 479..974 CDD:223540 139/509 (27%)
P-loop_NTPase 480..604 CDD:304359 29/136 (21%)
AAA 757..887 CDD:278434 66/134 (49%)
CG5776NP_001260420.1 SpoVK 288..785 CDD:223540 143/529 (27%)
AAA 307..447 CDD:278434 34/167 (20%)
AAA 572..707 CDD:278434 66/134 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445208
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23077
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.