DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex1 and prx-1

DIOPT Version :9

Sequence 1:NP_652016.1 Gene:Pex1 / 45460 FlyBaseID:FBgn0013563 Length:1006 Species:Drosophila melanogaster
Sequence 2:NP_510386.2 Gene:prx-1 / 181538 WormBaseID:WBGene00004191 Length:996 Species:Caenorhabditis elegans


Alignment Length:1030 Identity:256/1030 - (24%)
Similarity:429/1030 - (41%) Gaps:227/1030 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 TEIGINARAAKEIGLHENDLVKCALIADVLNLRSVHVTPVSSKDWEIIELSTEKISGSVLEQTRI 125
            |.:.||:..|:..|.||...|....:........:.|.|.:..|:.:|..|...|....|.|.|:
 Worm    71 TNVFINSVFAEVSGFHEKQEVILEKMESKTYCSHIEVAPRTEDDYSVIAQSQSSIENEFLNQIRL 135

  Fly   126 VNSTQILIVWINKSMQVALTVDRLKPHMNYG-RIDHNTELVVAPNLYKGLTNGTSNGVIEENTKL 189
            |:...|:..:::..:.|...:..:.|..|.. .::::|||.|     :.:|.|:.|         
 Worm   136 VSQNMIIPHFLSPGVYVQFRILNIVPASNKPVMLNNDTELHV-----QTVTEGSQN--------- 186

  Fly   190 SRSKTTAQVKDELTEKLTPLTHSSTVSNVKNTIQRNKRQDHMERLKKDLRRE-------SSRSFE 247
                         .||.|      ....|.|.:|....|..:.....:|.:.       ..::.|
 Worm   187 -------------DEKAT------MAQKVSNIVQDLSMQGFLSNYVINLEKTPIIGRVLPKKTVE 232

  Fly   248 FRVIRGLWREQAQESDVFVNGKHLPEFFDLDL----------------FYCMHTAADKDYYVRVR 296
            ..|..||  |:..:|.:::.||....:.:..:                |:.:|.:  .:.|:|  
 Worm   233 LWVKSGL--EKLDKSTIYIPGKESCLYSEHGIVEIRSQGRGENEERFQFFYLHRS--PNIYLR-- 291

  Fly   297 TVEDDIEDDLPETIHPSIELNANLMKLLGIKELER--------VVLRPKTTVVNF---------V 344
                          :.|.||:|:|..:....:||.        ..|.|...:..|         :
 Worm   292 --------------NQSNELDASLSHMFESLQLENRCHCVEGTNTLEPYMNIKIFGVTQNRICTL 342

  Fly   345 EKIELFANKKTHYKIME----NAFKRFVIERTQHKPMLFNQE--EVVRLEDDLLVTVGILPEHFR 403
            ...|:...|:|...:.|    |...:.:....|..|:|.:.|  |:....||..:.:.::|. .:
 Worm   343 RYCEIMMEKETFQWVKEFELTNVLTKSLHSELQGNPILLSVEGKELDVAVDDKAIRLKVVPS-MK 406

  Fly   404 YCVVDAQFLKESKIYAADLV-----RPVGEIIKE------------------------ETPPTSP 439
            ..|   :.:.|:..:..||.     :.:|::.::                        :.|.||.
 Worm   407 GLV---KRVTENTCFLFDLTTELIFQQLGDLKQKHGDTENTRRRRKRTEEAEASEQIPQKPETST 468

  Fly   440 L------SVQDLIQLPEYDKIVDQVVQELRMNLCLSADNSVMRQCNVLLAGASGTGKTVLVERIL 498
            :      ..:..:|:..:.|::.::.:     :|......||      :.|.:|:|||..::::.
 Worm   469 MENFGFAQNKHFVQIGSHSKLLSELDK-----VCCGGKQHVM------VLGGNGSGKTTFIKKLA 522

  Fly   499 DQLSRKPDYCHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLAHAAGEQSSQ 563
            .:||........:....:..|||..:.|:|.|.:.........|:.:.|::.||:.      ...
 Worm   523 RRLSHNSSVTFCKMVPCALLKGRSADIIEKLLSDTLHEMEVKKPSCLFLDDFDVIL------PQI 581

  Fly   564 DGEYYNRMADTVYQLIVQYTTNNAIAVIATVNELQTLNKRLSSP--RGRHVFQTVARLPNLERAD 626
            |.|..:...:.|..:..|......::|:.....|.:||......  |.|.:......|..|.:.|
 Worm   582 DQEQRHLAMEKVVSVFAQKLRTTEVSVVLVAQRLSSLNDGFVEQVMRARPIVSRKIELEQLTKED 646

  Fly   627 REIILRELCSHINVAKDLDLVKFSN-LTEGYRKCDLVQFVERAIFYAYRISKTQPLLTNDQLIES 690
            |..|....         |||.:.|: ::|..:|.|           .|..|:.:.|..:      
 Worm   647 RCEIFETF---------LDLPENSDIISEIVKKSD-----------GYTFSEIEKLAVS------ 685

  Fly   691 LEHTNSYC-LQGIQSNQRTGNDADANEMRVEE------------------LPGLESVVG------ 730
               .|..| ::|::.         ..|:.||:                  ||.:|.|.|      
 Worm   686 ---INVECAIKGVKY---------ITEIEVEKAFECFVAGKMGKIEDGQVLPTMEDVGGMFEQKK 738

  Fly   731 VLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPELLAKYI 795
            :||:|::||.:||.:|.:..:....|:||:||.|.|||.|.:...::.|..:::|||||||:|||
 Worm   739 LLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVNVKGPELLSKYI 803

  Fly   796 GQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRGHDSTGVTDRVVNQLLTELDGVE-GLQGVTV 859
            |.||||||.:|.:|||..||:|||||.||||||||||||||||||||||||||||.| |::||.:
 Worm   804 GASEENVRLVFEKARSCAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVII 868

  Fly   860 IAATSRPELLDPALLRSGRIDRLVECPLPDAPARVRIFEALSSTLSLDECVDFDWFAGKTANYTG 924
            :..|||.:|:|.||||.||.|..|.|..|:...|:.|.:.|::.|...: |||:..|.||..::|
 Worm   869 LGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKPTD-VDFECLAQKTDGWSG 932

  Fly   925 ADIQSILTSANMAAVKE-ALAQFGHEKLAKKISLKQKHLIESFQTTRPSLSASDV 978
            ||:|.:.|:|.....:: |..:.|.|:  ..:.:.|..:...|..:.|....|.|
 Worm   933 ADLQLLFTNAQFYNARQIAKEEDGLEE--DNVPIDQASIESVFNDSIPKPKRSQV 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex1NP_652016.1 PEX-1N 93..168 CDD:286361 18/75 (24%)
SpoVK 479..974 CDD:223540 169/524 (32%)
P-loop_NTPase 480..604 CDD:304359 25/123 (20%)
AAA 757..887 CDD:278434 84/130 (65%)
prx-1NP_510386.2 PEX-1N 103..179 CDD:370392 18/80 (23%)
P-loop_NTPase 481..>522 CDD:393306 10/51 (20%)
SpoVK 511..938 CDD:223540 160/471 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167107
Domainoid 1 1.000 171 1.000 Domainoid score I2260
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 280 1.000 Inparanoid score I1763
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000137
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103335
Panther 1 1.100 - - LDO PTHR23077
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R902
SonicParanoid 1 1.000 - - X3465
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.920

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