DRSC/TRiP Functional Genomics Resources

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Protein Alignment MTNR1B and npr-31

DIOPT Version :10

Sequence 1:NP_005950.1 Gene:MTNR1B / 4544 HGNCID:7464 Length:362 Species:Homo sapiens
Sequence 2:NP_495481.2 Gene:npr-31 / 188235 WormBaseID:WBGene00020319 Length:408 Species:Caenorhabditis elegans


Alignment Length:377 Identity:85/377 - (22%)
Similarity:150/377 - (39%) Gaps:87/377 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    39 VAPALSAVL-IVTTAVDVVGNLLVILSVLRNRKLRNAGN---------LFLVSLALADLVVAFYP 93
            ::|..:..| |.|....:.||:.|:.||.|:||.::..:         .::..||:.||.|..  
 Worm     2 MSPYFAGFLYIATVLTGLFGNIWVVCSVARSRKPKSLMSRSSPSDRLRAYISVLAVIDLTVLM-- 64

Human    94 YPLILVAI--FYDGWALGEEHCKASAFVMGLSV-IGSVFNITAIAINRYCYI----CHSMAYHRI 151
             .|::.|:  |...:.|....|:| .||:..|| |.|:..::.|:|.||..|    |..:     
 Worm    65 -ALLVRALYHFLPHFMLDSNSCRA-MFVLENSVKITSLTVLSCISIERYITIRKPFCSEV----- 122

Human   152 YRRWH---TPLHICLIWLLTVVALLPNFFVGSLEYD----PRIYSCTFIQTASTQYTAAVVVIHF 209
             ||..   ||:...:...|.|.|::......::..|    .|.|....|...::..||    :.|
 Worm   123 -RRQFVNATPIGASIFVGLVVGAIIVQINSVTVSSDGLNCVRSYRGKAIPRVASYLTA----VAF 182

Human   210 LLPIAVVSFCYLRIWVLVLQARRK-----------AKPESRLCLKPSDLRSFLTMFV-VFVIFAI 262
            |:.:.::|..|.:|   |...|||           ::....|..:|..:|......| |.|...:
 Worm   183 LVDLTIISLNYSQI---VRHVRRKFTKRRARVQANSRVRESLVNEPRYMREMTAAIVRVGVFHVV 244

Human   263 CWAPLNCIGLAVAINPQEMAPQIPEG----------------LFVTSYLLAYFNSCLNAIVYGLL 311
            ||.|::   |...|....:..::..|                :|:.::|.: .|:..:.|.|.::
 Worm   245 CWLPMS---LMQFIPDNTIQSELTAGIRLFSNFRDYSITRWLIFIATWLTS-MNAAGDWIFYAVM 305

Human   312 NQNFRR------EYKRILLALWNPRHCIQDASKGSHAEGLQSPAPPIIGVQH 357
            |::.|.      |.::        |..:..|:..|....|:...||.:.|.|
 Worm   306 NRDLRNLIRFATERRK--------RSTMSHAASPSTNRSLRQQVPPSMKVLH 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTNR1BNP_005950.1 7tmA_Mel1B 41..319 CDD:320522 76/335 (23%)
TM helix 1 42..68 CDD:320522 8/26 (31%)
TM helix 2 75..100 CDD:320522 6/33 (18%)
TM helix 3 113..143 CDD:320522 13/34 (38%)
TM helix 4 155..177 CDD:320522 5/24 (21%)
TM helix 5 197..226 CDD:320522 7/28 (25%)
TM helix 6 244..274 CDD:320522 9/30 (30%)
TM helix 7 287..312 CDD:320522 6/40 (15%)
npr-31NP_495481.2 7tm_classA_rhodopsin-like 9..306 CDD:410626 73/317 (23%)
TM helix 1 9..32 CDD:410626 8/22 (36%)
TM helix 2 39..73 CDD:410626 7/36 (19%)
TM helix 3 85..115 CDD:410626 12/30 (40%)
TM helix 4 128..145 CDD:410626 4/16 (25%)
TM helix 5 170..195 CDD:410626 7/28 (25%)
TM helix 6 222..270 CDD:410626 11/50 (22%)
TM helix 7 281..306 CDD:410626 5/25 (20%)

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