DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment can and Spag16

DIOPT Version :10

Sequence 1:NP_524827.1 Gene:can / 45432 FlyBaseID:FBgn0011569 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_083436.2 Gene:Spag16 / 66722 MGIID:1913972 Length:639 Species:Mus musculus


Alignment Length:610 Identity:123/610 - (20%)
Similarity:216/610 - (35%) Gaps:164/610 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 YWEEMSLRPVDKGEVSQEELMAILNEDESSPDHRSECDIDEAIRTRDGSDFYEDSAQFLENMENV 309
            |.|::::....:.|...||   |.:::.|.|:  .|.|:::||.      ...:.|:.:..:|..
Mouse    37 YLEQVTITETSEDECEYEE---IPDDNFSIPE--GEEDLEKAIH------IIGEQARDIHILEQQ 90

  Fly   310 SLLVIKEDSVFADYEFAVKKLIK----------------LIQSTPSHYK-----YEIYILLYPLL 353
            ::|..:.....|..:|....|||                |||...|.:|     .::|..:  :|
Mouse    91 TILPARNVMQEAIEDFLCNFLIKMGMTRTLDCFQAEWYELIQKKGSDFKGLGNVPDVYSQV--ML 153

  Fly   354 VLTYLQMMASD------KIQKARMLLVRFQDHLD--DSYISRIIKLREISKPAEVPNKARKLLAG 410
            :.|..:.:..:      ..:||:..|:|.|...|  ..:..||::            :..||:|.
Mouse   154 LETENKNLKKELKHFKQAAEKAKEDLLRTQKERDFHRMHHKRIVQ------------EKNKLIAD 206

  Fly   411 LEKVKIEMS--EGAFRQLLLCTEEWTRGQQEKLLSHFQIQPYSEDDKPQQRFAIGQPLLEPIWYG 473
            |:.:|:..:  |...|.|   .|:.....:||:|:..      |.|:...:.:..|..|:.|..|
Mouse   207 LKGLKLHYASYEPTIRVL---HEKHHALLKEKMLTSL------ERDRAVGKISGLQATLKNIDMG 262

  Fly   474 APE-PLHKKDFAARPFFQKRRKKRSEPQLSDNLHLPPVNRVYNPIPNKMDLLHMKSDEQYRMKLD 537
            ..: |:.|..:.:....::...:.......:|         .:..|.:..|...:.:..|:.||.
Mouse   263 HIQVPVIKGSYESASITRESGDRAGHSCEKEN---------SSEGPTQKSLREAREEVGYKSKLK 318

  Fly   538 RNNLPSTYLYTTSPSDEVVICATFSEGNSMLALGTVSSKVYVFSLKPSKLVQVKAAQWLKNLDTG 602
            .....|.:.....|...|..|             |.:.....|..|.:.:.::            
Mouse   319 NEKKDSEFPVDMQPDPNVTSC-------------TENVSAAKFDYKLNNIFRL------------ 358

  Fly   603 MAGVDKDMIDPIKKFTRRTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGH 667
                                  |:.||.....:|...:||:||||   |||.:            
Mouse   359 ----------------------HELPVSCIVMHPCRDYLISCSED---RLWKM------------ 386

  Fly   668 LAPVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHYMATGSADC 732
                   |..|:|....|.|                    ||...|..|.|||:...:||.|.|.
Mouse   387 -------VGLPQGNVLLTGS--------------------GHTDWLSGCCFHPSGSKLATSSGDS 424

  Fly   733 TVRIWDIVKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASI 797
            |:::||:.|........||...:.:..:..||.::.|...|....|||..:|........|..|:
Mouse   425 TIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSV 489

  Fly   798 NTMEISLDNNILVVGGQDCQLTLWD 822
            |::|....:|||:....|..|::||
Mouse   490 NSIEFFPFSNILLTASADKTLSVWD 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canNP_524827.1 TAF5_NTD2 320..453 CDD:176269 33/163 (20%)
WD40 repeat 591..624 CDD:293791 0/32 (0%)
WD40 619..>823 CDD:238121 54/204 (26%)
WD40 repeat 629..666 CDD:293791 11/36 (31%)
WD40 repeat 672..708 CDD:293791 5/35 (14%)
WD40 repeat 713..749 CDD:293791 13/35 (37%)
WD40 repeat 760..790 CDD:293791 8/29 (28%)
Spag16NP_083436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..333 7/61 (11%)
WD40 352..638 CDD:238121 54/239 (23%)
WD 1 358..397 16/94 (17%)
WD40 repeat 363..400 CDD:293791 16/78 (21%)
WD 2 400..439 15/38 (39%)
WD40 repeat 406..442 CDD:293791 12/35 (34%)
WD 3 442..481 10/38 (26%)
WD40 repeat 447..483 CDD:293791 8/35 (23%)
WD 4 484..523 11/31 (35%)
WD40 repeat 490..524 CDD:293791 9/25 (36%)
WD 5 526..565
WD40 repeat 531..567 CDD:293791
WD 6 568..608
WD40 repeat 573..608 CDD:293791
WD 7 609..639
WD40 repeat 614..638 CDD:293791
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.