DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment can and taf5

DIOPT Version :9

Sequence 1:NP_524827.1 Gene:can / 45432 FlyBaseID:FBgn0011569 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_001032508.1 Gene:taf5 / 641491 ZFINID:ZDB-GENE-051120-180 Length:743 Species:Danio rerio


Alignment Length:802 Identity:209/802 - (26%)
Similarity:359/802 - (44%) Gaps:126/802 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 PFNKSAEDE-KPKACEE-------------LPSIPVFTGPMPSMPIYDEETCQFEMVPPIIQPDL 177
            |....||.| ||:...:             |.|.|:...|....|..:::    :.:..::|  .
Zfish     8 PMEVDAEKETKPEILSDGTANPSGNTGGGTLSSSPLTAAPAAGAPKPEDQ----QTLLAVLQ--F 66

  Fly   178 IKEVTDAEMPIELDKSDSELEKEKLKADEDDNFSDSNTSSSFSLSSLDDYDYGETDLDEQHNENK 242
            :|....|| .:|:.:.::.|.:|.     :|:.:|:.....       |.|.|:|.         
Zfish    67 LKRSKLAE-SVEILRREAGLAEEL-----EDSHTDAGAGGK-------DGDAGDTK--------- 109

  Fly   243 CTYWEEMSLRPVDKGEVSQEELMAILNEDESSPDHRSECDIDEAIRTRDGSDFYEDSAQFLENME 307
             |....:|:    .|..:.:..:.                   .|..:.|.|           ..
Zfish   110 -TLLSRVSI----AGAAAPQSTLT-------------------PIPAKSGDD-----------QP 139

  Fly   308 NVSLLVIKEDSVFAD---YEFAVKKLIKLIQSTPSHYKYEIYILLYPLLVLTYLQMMASDKIQKA 369
            :|| :|:...|...|   |:.....|.|.|:|....::.|:..|.|||.|..||:::.::...:|
Zfish   140 DVS-VVLSAYSQQGDPSLYKVYYSDLKKFIESVLDCHRAELSQLFYPLFVHMYLELVYNNHESEA 203

  Fly   370 RMLLVRFQDHLDDSYISRIIKLREISKPAEVPNKARKLLAGLEKVKIEMSEGAFRQLLLCTEE-- 432
            :....:|....:..|...:..|..::|...:......|.....:..:.:|..:::.|....:|  
Zfish   204 KAFFDKFSGDQECYYEDDLRVLCGLTKKEHMKGNEALLDFRTSRFVLRISRDSYQLLKRHLQERQ 268

  Fly   433 ----WTRGQQEKLLSHFQIQPYSEDDKPQQRFAI-GQPLLE----PIWYG---APE---PLHKKD 482
                |...|:...:..|...|.|:........:: |:...|    .::||   .||   ||..:|
Zfish   269 NNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSLAGEARREVNKVKVFYGLLKEPEIEVPLDDED 333

  Fly   483 FAA-----RPFFQKRRK-------KRSEPQLSDNLHLPPVNRVYNPIP-----NKMD-LLHMKSD 529
            ..|     :|..:|.:|       |:.:|      :.|..||:  |:|     :|:| :::||..
Zfish   334 EEAENEEGKPKKKKTKKDSMGSKSKKQDP------NAPQQNRI--PLPELKDSDKLDKIMYMKES 390

  Fly   530 EQYRMKLDRNNLPSTYLYTTSPSDEVVICATFSEGNSMLALGTVSSKVYVFSLKPSKLVQVKAAQ 594
            .: |::|....|||...||...:.:.:....|::.:|::|.|...|.|.|:|:.|.||.:||:|.
Zfish   391 TK-RIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAA 454

  Fly   595 WLKNLDTGMAGVDKDMIDPIKKFTRRTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWS 659
            .|..:|.....|.:.::|.......:.|:||.|||||.||:|:..:|::.|||.::|||.|.:::
Zfish   455 DLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFT 519

  Fly   660 CVVIFSGHLAPVCFVVFAPRGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHY 724
            |:|.:.||..||....|:|.||||.:...|..||:|..|:.:|.||..||||::....||||.:|
Zfish   520 CLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY 584

  Fly   725 MATGSADCTVRIWDIVKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILMQF 789
            :||||:|.|||:||::....||||.|||..|.:|.:|..|::|.||..|..:::||..:.:::..
Zfish   585 VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAE 649

  Fly   790 FDHHKASINTMEISLDNNILVVGGQDCQLTLWDFEQVIKNYLNRAKISMKNQAGTQESSANNLLV 854
            ...|..:|..::.|.|..|:..|..|..:.|||..:.|.:.......:........::| ..||:
Zfish   650 LKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDDFTAATGHIHLPDNS-QELLL 713

  Fly   855 SSFFTKGEPFYMIRFTRRNLLL 876
            .::.:|......:.||||||||
Zfish   714 GTYHSKSTAVIHLHFTRRNLLL 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canNP_524827.1 TAF5_NTD2 320..453 CDD:176269 28/141 (20%)
WD40 <503..829 CDD:225201 120/331 (36%)
WD40 repeat 591..624 CDD:293791 7/32 (22%)
WD40 619..>823 CDD:238121 84/203 (41%)
WD40 repeat 629..666 CDD:293791 16/36 (44%)
WD40 repeat 672..708 CDD:293791 14/35 (40%)
WD40 repeat 713..749 CDD:293791 18/35 (51%)
WD40 repeat 760..790 CDD:293791 8/29 (28%)
taf5NP_001032508.1 TAF5_NTD2 154..286 CDD:176269 24/131 (18%)
WD40 <392..683 CDD:225201 109/291 (37%)
WD40 415..682 CDD:238121 101/266 (38%)
WD40 repeat 416..484 CDD:293791 19/67 (28%)
WD40 repeat 490..526 CDD:293791 15/35 (43%)
WD40 repeat 531..567 CDD:293791 15/35 (43%)
WD40 repeat 574..609 CDD:293791 18/34 (53%)
WD40 repeat 615..651 CDD:293791 10/35 (29%)
WD40 repeat 657..683 CDD:293791 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596873
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0263
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D230914at33208
OrthoFinder 1 1.000 - - FOG0003655
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102926
Panther 1 1.100 - - O PTHR19879
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.710

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