DRSC/TRiP Functional Genomics Resources

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Protein Alignment can and taf73

DIOPT Version :9

Sequence 1:NP_524827.1 Gene:can / 45432 FlyBaseID:FBgn0011569 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_596254.1 Gene:taf73 / 2539882 PomBaseID:SPBC15D4.14 Length:642 Species:Schizosaccharomyces pombe


Alignment Length:631 Identity:172/631 - (27%)
Similarity:264/631 - (41%) Gaps:152/631 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 IQSTPSHYKYEIYILLYPLLVLTYLQMMASDKIQKARMLLVRFQ-DH--LDDSYISRIIKLREIS 395
            |..|...||.::..:|||:.|.:||.::..:..:.|......|: :|  |....|..:.:|:..|
pombe    71 IDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFFESFRIEHEVLHGYDIRALAQLKIAS 135

  Fly   396 KPAEV-------PNKAR---------------------------KLLAGLEKVKI---------- 416
            ...|:       .||.|                           :||.....:||          
pombe   136 DVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNGSGIIIRLLNQYIDIKITMPQVEGKED 200

  Fly   417 -------EMSEGAFRQLLLCTEEWTRGQQEKLLSHFQIQPYSEDDKPQQRFAIG-QPLLEPIWYG 473
                   ||.|....|.::..:|...|..|:||           |..:|...:| :||.|.:...
pombe   201 PNVQAVYEMDEAKNEQTIISEQEGIPGHSEQLL-----------DYNKQSIQLGLRPLSEEVVTT 254

  Fly   474 APEPLHKKDFAARPFFQKRRKKRSEPQLSDNLHLPPVNRVYNPIPNKMDLLHMK----------- 527
            ....|..||        |..:.|:|          .:|::.:|..|.::||..|           
pombe   255 LKNLLEVKD--------KDVEGRNE----------ALNKILHPAKNLVELLTEKENLINESTLES 301

  Fly   528 -----------SDEQYRMKL---DRNNL--------PSTYLYTTSPSDEVVICATFSEGNSMLAL 570
                       .|..|.:.|   ::|:|        ||.::||...:...|.||.||:..||.||
pombe   302 PSDPPLPPTKMKDIDYFVSLLESEQNSLILGKNATDPSVFMYTMHNTLSAVNCAAFSDDASMFAL 366

  Fly   571 GTVSSKVYVFSLKPSKLVQVKAAQWLKNLDTGMAGVDKDMIDPIKKFTRRTLYGHQGPVYGCSFN 635
            |...|.::::|                :.:.|...:.....:|::|   .:|.||..||:|.|.:
pombe   367 GCADSSIHLYS----------------STNNGPQPLVGSQNEPLQK---SSLIGHTRPVFGVSIS 412

  Fly   636 PEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGYYFATASDDCTARVWMQDNT 700
            |:..|:::||||...|||...:.|.:|.::||.||:..|.|:|.||||||||.|.|||:|..::.
pombe   413 PQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHA 477

  Fly   701 KPARILQGHLAELGVCLFHPNRHYMATGSADCTVRIWDIVKAVQVRIFRGHKSRITALIYSICGR 765
            .|.|:..||..::....||||..|:||||:|.|.|:||:.....||:|..|.|.::||..|..|.
pombe   478 APLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGL 542

  Fly   766 YLVSGGDDNLIMIWDTANEILMQFFDHHKASINTMEISLDNNILVVGGQDCQLTLWDFEQVIKNY 830
            .|.|..:..:|.:||..:......|..|.:.:.::..|.||.|||.||.|..:..||        
pombe   543 SLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWD-------- 599

  Fly   831 LNRAKISMKNQAGTQESSANNLLVSSFFTKGEPFYMIRFTRRNLLL 876
                 ::.:|.....|.|.   |:.:|.||......:.|||||..|
pombe   600 -----LTYRNNLSDGEQSP---LLFNFKTKNTIIQNLSFTRRNYCL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canNP_524827.1 TAF5_NTD2 320..453 CDD:176269 34/172 (20%)
WD40 <503..829 CDD:225201 113/358 (32%)
WD40 repeat 591..624 CDD:293791 4/32 (13%)
WD40 619..>823 CDD:238121 82/203 (40%)
WD40 repeat 629..666 CDD:293791 14/36 (39%)
WD40 repeat 672..708 CDD:293791 18/35 (51%)
WD40 repeat 713..749 CDD:293791 16/35 (46%)
WD40 repeat 760..790 CDD:293791 7/29 (24%)
taf73NP_596254.1 LisH 14..38 CDD:128913
TFIID_NTD2 58..186 CDD:309580 23/114 (20%)
WD40 350..600 CDD:238121 98/281 (35%)
WD40 repeat 354..401 CDD:293791 15/65 (23%)
WD40 repeat 407..443 CDD:293791 13/35 (37%)
WD40 repeat 448..484 CDD:293791 18/35 (51%)
WD40 repeat 491..526 CDD:293791 16/34 (47%)
WD40 repeat 532..568 CDD:293791 9/35 (26%)
WD40 repeat 574..600 CDD:293791 11/38 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0263
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003655
OrthoInspector 1 1.000 - - mtm9314
orthoMCL 1 0.900 - - OOG6_102926
Panther 1 1.100 - - O PTHR19879
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.770

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