DRSC/TRiP Functional Genomics Resources

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Protein Alignment can and Taf5

DIOPT Version :10

Sequence 1:NP_524827.1 Gene:can / 45432 FlyBaseID:FBgn0011569 Length:942 Species:Drosophila melanogaster
Sequence 2:XP_320836.5 Gene:Taf5 / 1280962 VectorBaseID:AGAMI1_007736 Length:651 Species:Anopheles gambiae


Alignment Length:650 Identity:217/650 - (33%)
Similarity:337/650 - (51%) Gaps:86/650 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 DEAIRTRDG-SDFYEDSAQFLENMENVSLLVIKEDSVFADYEFAVKKLIKLIQSTPSHYKYEIYI 347
            :|.::...| :|..|:.|.  |...|..|...|.:.....||.:..:|.:.::.:...||:|:.:
Mosquito    24 EELLKKEAGLTDIPENVAG--EAEVNSVLAAYKSEGDPDIYENSYMELRRFVEESLDIYKHELAL 86

  Fly   348 LLYPLLVLTYLQMMASDKIQKARMLLVRFQDHLDDSYISRIIKLREISKPAEVPNK--------- 403
            :|||:||..|::::.:....:|:.|:.:|....:..|...:.||..::|..|:...         
Mosquito    87 ILYPVLVHMYIELVYNSHEVQAKKLITKFGPEQEYYYQDELAKLAMVTKRDEMSGNDITDTFKSN 151

  Fly   404 ------ARKLLAGL-----------------EKVKIEMSEGAFRQLLLC-------TEEWTRGQQ 438
                  :|..|:.|                 |.:..::.||..|....|       |.|..| |.
Mosquito   152 AFTIRISRDTLSLLKRHLHEKKASVILNIVNEHMYFDLYEGVARNKAQCDATSGAMTGEAKR-QD 215

  Fly   439 EK------LLSHFQIQ-----PYSEDDKPQQRFAIGQPLLEPIWYGAPEPLHKKDFAARPFFQKR 492
            .|      ||....:|     |..|||.           ::|   .||:...||.....|.|.| 
Mosquito   216 NKIKVYYGLLKEPDVQTLVAAPPEEDDD-----------MDP---DAPDKPKKKKPKKDPLFSK- 265

  Fly   493 RKKRSEPQLSDNLHLPPVNRVYNPIP-----NKMDLLHMKSDEQYRMKLDRNNLPSTYLYTTSPS 552
             |.:|:|      :.||::|:  |:|     :||:.:....:...|:.|..:.|||..:||...:
Mosquito   266 -KSKSDP------NAPPLDRI--PLPKLKDVDKMEKIKALRESTKRVNLGPDLLPSICMYTLLNA 321

  Fly   553 DEVVICATFSEGNSMLALGTVSSKVYVFSLKPSKLVQVKAAQWLKNLDTGMAGVDKDMIDPIKKF 617
            :..|.||.|||.:|:|::|.|.|.:.|:|:.|.||.::|:|..||.:|.....|...|:|..|..
Mosquito   322 NHTVTCADFSEDSSLLSVGFVDSSIKVWSMTPMKLREMKSADQLKEIDRDAEDVLIRMLDDRKAE 386

  Fly   618 TRRTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGYY 682
            :.|||:||.||||..||.|:...|::||||.:||||.|.:|:|||::.||..||..|.|:|.|:|
Mosquito   387 SCRTLHGHSGPVYRTSFAPDRTMLLSCSEDSTVRLWSLHTWTCVVVYKGHQYPVWDVRFSPHGHY 451

  Fly   683 FATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHYMATGSADCTVRIWDIVKAVQVRI 747
            |.:.|.|.|||:|..|:.:|.||..|||:::.||:||||.:|:||||:|.|||:||:......|:
Mosquito   452 FVSCSHDRTARLWSTDSHQPLRIFAGHLSDVDVCIFHPNSNYVATGSSDRTVRLWDVCVGNHHRL 516

  Fly   748 FRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASINTMEISLDNNILVVG 812
            ..|||:.|.:|.:|:|||||.||..|..::|||.|:..|:.....|.|||:::..|.|..||..|
Mosquito   517 LTGHKAPIYSLAFSMCGRYLASGSADKRVLIWDLAHGHLIAALTGHTASIHSLCFSRDGTILGTG 581

  Fly   813 GQDCQLTLWDFEQVIKNYLNRAKISMKNQAGTQESSANNLLVSSFFTKGEPFYMIRFTRRNLLLG 877
            |.||.|.||||.:::.: ::...:::.:....::...  .|:.:|.||..||..:.|||||||||
Mosquito   582 GLDCALKLWDFTKLVDD-ISGENVNVSHNPDVRDGEP--YLLRTFPTKQSPFLTLHFTRRNLLLG 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canNP_524827.1 TAF5_NTD2 320..453 CDD:176269 37/182 (20%)
WD40 repeat 591..624 CDD:293791 12/32 (38%)
WD40 619..>823 CDD:238121 101/203 (50%)
WD40 repeat 629..666 CDD:293791 19/36 (53%)
WD40 repeat 672..708 CDD:293791 16/35 (46%)
WD40 repeat 713..749 CDD:293791 18/35 (51%)
WD40 repeat 760..790 CDD:293791 14/29 (48%)
Taf5XP_320836.5 None

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