DRSC/TRiP Functional Genomics Resources

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Protein Alignment can and taf5

DIOPT Version :9

Sequence 1:NP_524827.1 Gene:can / 45432 FlyBaseID:FBgn0011569 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_001135586.1 Gene:taf5 / 100216139 XenbaseID:XB-GENE-1004611 Length:777 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
canNP_524827.1 TAF5_NTD2 320..453 CDD:176269
WD40 <503..829 CDD:225201
WD40 repeat 591..624 CDD:293791
WD40 619..>823 CDD:238121
WD40 repeat 629..666 CDD:293791
WD40 repeat 672..708 CDD:293791
WD40 repeat 713..749 CDD:293791
WD40 repeat 760..790 CDD:293791
taf5NP_001135586.1 TAF5_NTD2 188..320 CDD:176269
WD40 <426..716 CDD:225201
WD40 449..719 CDD:238121
WD40 repeat 450..507 CDD:293791
WD40 repeat 524..560 CDD:293791
WD40 repeat 565..601 CDD:293791
WD40 repeat 608..643 CDD:293791
WD40 repeat 649..685 CDD:293791
WD40 repeat 691..737 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D230914at33208
OrthoFinder 1 1.000 - - FOG0003655
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19879
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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