DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO1F and didum

DIOPT Version :9

Sequence 1:XP_011526326.1 Gene:MYO1F / 4542 HGNCID:7600 Length:1119 Species:Homo sapiens
Sequence 2:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster


Alignment Length:967 Identity:306/967 - (31%)
Similarity:483/967 - (49%) Gaps:163/967 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    18 GVDDMVLLPQITEDAIAANLRKRFMD-DYIFTYIGSVLISVNPFKQMPYFTDREIDLYQGAAQYE 81
            |.:|:..|..:.|..:..|||.||.: ..|:||.|.:|:::||:.:||.:....|..|:|.|..:
  Fly    71 GQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGD 135

Human    82 NPPHIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVKDIILQ 146
            ..|||:||.:..|..:..:..|..:|:||||||||||:|||.|.|.:.| ||.|....|:..:|.
  Fly   136 LEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAV-GGSESETQVERKVLA 199

Human   147 SNPLLEAFGNAKTVRNNNSSRFGKYFEIQF-SRGGEP--DGGKISNFLLEKSRVVMQNENERNFH 208
            |:|::||||||||.||:|||||||:.::.| ::.|..  .|..:..:||||||||.|.:.|||:|
  Fly   200 SSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYH 264

Human   209 IYYQLLEGASQEQRQNLGLMTPDYYYYLNQSDTYQVDGTDDRSDFGETLSAMQVIGIPPSIQQL- 272
            |:|||.  |::.:...|.|...|.:.:||.....:::...|...|.||:.||.|:|.  ||||: 
  Fly   265 IFYQLC--AARSKYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGF--SIQQIA 325

Human   273 -VLQLVAGILHLGNI----SFCEDGNYARVESVDL------LAFPAYLLGIDSGRLQEKLTSRKM 326
             :::::|||||||||    .|.|.......:|.|:      |...|.||.:.:..|:..|..||:
  Fly   326 DIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMRKI 390

Human   327 DSRWGGRSESINVTLNVEQAAYTRDALAKGLYARLFDFLVEAINRAMQKPQEEYS-IGVLDIYGF 390
            :|    .:|.:.:..::|.|...||||||.:||:||.::|..:|:::....::.| |||||||||
  Fly   391 ES----VNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDIYGF 451

Human   391 EIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIQYFNNKVVCDLIENKLSPP 455
            |.|:.|.|||||||:.||||||.|.:...|.|||||::|||.||.|.:::|:...||||::|   
  Fly   452 ETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRL--- 513

Human   456 GIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTHEHFNS---WSAGFVIHHYAGKVSYDVSGFC 517
            |::.:||:.|....    |:|::...||........||..   .:..|.|.|::..|.|||:||.
  Fly   514 GVLDLLDEECRMPK----GSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFL 574

Human   518 ERNRDVLFSDLIELMQTSEQAFLRMLFP-EKLDG--DKKGRPSTAGSKI------KKQAND---- 569
            |:|||.:..:|.:::..|..:..:.:.. |::|.  ....:.||.|.::      |:|.||    
  Fly   575 EKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRR 639

Human   570 ---------------------LVATLMRCTPHYIRCIKPNETKRPRDWEENRTGDSPPRGDSAYP 613
                                 |::||...||||:||||||:.|....||            :|..
  Fly   640 VVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWE------------TAKI 692

Human   614 PHQSQAPGGIPGPEGEHQGAQSRLRLPPPVRQIPAEPSALRYAILTPETWPRWRGDERQGVQHLL 678
            ..|.:|.|.:........|..||...|         ...:||.:|...: ...:.|.:...::::
  Fly   693 IQQLRACGVLETVRISAAGFPSRWLYP---------DFYMRYQLLVYRS-KLDKNDMKLSCRNIV 747

Human   679 RAVNMEPDQYQMGSTKVFVKNPESLFLLEEVRE--------------RKF---DGFART------ 720
            .....:.|:|:.|:|::|.:..:..| ||:||.              |:|   ..|.|.      
  Fly   748 MKWIQDEDKYRFGNTQIFFRAGQVAF-LEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVING 811

Human   721 IQKAWRRHVAVRKYEEMREEASNILLNKKE----------RRRNSIN-----------RN----F 760
            |||..|.::|..:.::|||..:.::|:|..          |.|:||:           ||    .
  Fly   812 IQKHARGYLARERTQKMREARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAM 876

Human   761 VGDYLGLEERPELRQFLGKRERVDFADSVTKYDRRFKPIKRDLILTPKCV-YVIGREKVKKGPEK 824
            ...|..::.:..:|..|.:|          .|.:|    :|::|:....: ..:.|.|.|:...:
  Fly   877 RDHYRAVQIQRFVRGALARR----------AYQKR----RRNIIICQAAIRRFLARRKFKRMKAE 927

Human   825 GQVCEVLKKKVDIQALRGVSLSTRQDDFFILQEDAADSFLESVFKTEFVSLLCKRFE 881
            .:....::.|......:.:|:..|.|:   |..|  :|.|:  .||..:|:|..:.|
  Fly   928 AKTISHMENKYMGLENKIISMQQRIDE---LNRD--NSNLK--HKTSEISVLKMKLE 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1FXP_011526326.1 MYSc 12..711 CDD:214580 261/746 (35%)
MYSc_Myo1 31..698 CDD:276829 253/720 (35%)
Myosin_TH1 738..918 CDD:283635 34/170 (20%)
SH3_MyoIe_If_like 1066..1118 CDD:212761
didumNP_724569.1 MYSc 65..778 CDD:214580 260/745 (35%)
MYSc_Myo5 84..767 CDD:276831 253/720 (35%)
IQ 900..922 CDD:197470 5/25 (20%)
GBP_C <971..1086 CDD:303769 2/7 (29%)
coiled coil 1049..1068 CDD:293879
coiled coil 1077..1086 CDD:293879
JAKMIP_CC3 <1190..1299 CDD:292653
Myo5_CBD 1424..1792 CDD:271254
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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