DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO1F and ck

DIOPT Version :9

Sequence 1:XP_011526326.1 Gene:MYO1F / 4542 HGNCID:7600 Length:1119 Species:Homo sapiens
Sequence 2:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster


Alignment Length:877 Identity:300/877 - (34%)
Similarity:462/877 - (52%) Gaps:104/877 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    12 HNVKQSGVDDMVLLPQITEDAIAANLRKRFMDDYIFTYIGSVLISVNPFKQMPYFTDREIDLYQG 76
            |.....||:||:.|..:.|..|..||..|:.::.|:||.||:|::|||::.:|.:|..:|.||:.
  Fly    58 HASSVQGVEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKE 122

Human    77 AAQYENPPHIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVK 141
            ....|.||||:|:.||.|.:|....::||::||||||||||.:.|.|:.|::.:||   |...::
  Fly   123 RKIGELPPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISG---KHSWIE 184

Human   142 DIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVMQNENERN 206
            ..||::||:|||||||||:||:||||||||.:|.||..|..:|.||..:||||||:|.||.:|||
  Fly   185 QQILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERN 249

Human   207 FHIYYQLLEGASQEQRQNLGLMTPDYYYYLNQSDTYQVDGTDDRSDFGETLSAMQVIGIPPSIQQ 271
            :|::|.:|.|.|.:::..|.|.....|.||...::...:|.||.::|.:..|||:|:..  |.|:
  Fly   250 YHVFYCILAGLSADEKSRLDLGMAADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLF--SDQE 312

Human   272 L--VLQLVAGILHLGNISFCEDGNYARVESVDLLAFP--------AYLLGIDSGRLQEKLTSRKM 326
            :  :::|:|.:||.|||.:    ....|:::|....|        |.|||:....|.:.||.|.:
  Fly   313 IWEIIKLLAALLHCGNIKY----KATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTL 373

Human   327 DSRWGGRSESINVTLNVEQAAYTRDALAKGLYARLFDFLVEAINRAMQKPQ--EEYSIGVLDIYG 389
            .:    ..|::..||:.:|:...|||..||:|.|:|..:|..||.|:.||:  ...:||||||:|
  Fly   374 FA----HGETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFG 434

Human   390 FEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIQYFNNKVVCDLIENKLSP 454
            ||.|.:|.|||||||:.||.|||.|::...|.|||||..|.|.|..|::.:|:...|||  .:..
  Fly   435 FENFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLI--AIKQ 497

Human   455 PGIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTHEHF----NSWSAGFVIHHYAGKVSYDVSG 515
            ..||:::|:......    |.|||:|.||....|:|:::    :..:..|.::|:||.|.||..|
  Fly   498 LNIMALIDEEARFPK----GTDQTMLAKLHKTHGSHKNYLKPKSDINTSFGLNHFAGVVFYDTRG 558

Human   516 FCERNRDVLFSDLIELMQTSEQAFLRMLFPEKLD--GDKKGRPSTAGSKIKKQANDLVATLMRCT 578
            |.::|||....||:.|:..|...|||.:|.:.::  .:.:.|..|..::.:|..:.|:.||..|.
  Fly   559 FLDKNRDTFSPDLLHLVSQSTNKFLRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQ 623

Human   579 PHYIRCIKPNETKRPRDWEENRTGDSPPRGDSAYPPHQSQAPGGIPGPEGEHQGAQSRLRLPP-- 641
            |.:||||||||.|:|..::.                       |:...:..:.|....:|:..  
  Fly   624 PFFIRCIKPNELKKPMMFDR-----------------------GLCCRQLRYSGMMETIRIRRAG 665

Human   642 -PVRQIPAEPSALRYAILTPETWPRWRGDERQGVQHLLRAVNMEPDQYQMGSTKVFVKNPESLFL 705
             |:|....| ...||..|.|...|..|.| .|.....:.||.:....||:|.||||:|:...|||
  Fly   666 YPIRHGFRE-FVERYRFLIPGVPPAHRTD-CQAATSRICAVVLGKSDYQLGHTKVFLKDAHDLFL 728

Human   706 LEE----------VRERKFDGF------------ARTIQKAWRRHVAVRKYEEMREEASNILLNK 748
            .:|          :.:|...|:            |.|:|:.|:.:...::|..||.....:....
  Fly   729 EQERDRVLTRKILILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALI 793

Human   749 KERRRNSINRNFVGDYLGLEERPELRQFLGKRERVDFADSVTKYDRRFKPIKRDLILTPKCVYVI 813
            :.|..:...|:..|..:||:  ...|.:|.:||......:|.|....   ::|.:.:        
  Fly   794 RSRVLSHRFRHLRGHIVGLQ--AHARGYLVRREYGHKMWAVIKIQSH---VRRMIAM-------- 845

Human   814 GREKVKKGPEKGQVCEVLK-KKVDIQAL--RG 842
             |...|...|..|..|||: :|::.|.|  ||
  Fly   846 -RRYRKLRLEHKQFAEVLQLRKLEEQELLHRG 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO1FXP_011526326.1 MYSc 12..711 CDD:214580 267/729 (37%)
MYSc_Myo1 31..698 CDD:276829 255/687 (37%)
Myosin_TH1 738..918 CDD:283635 25/108 (23%)
SH3_MyoIe_If_like 1066..1118 CDD:212761
ckNP_001285949.1 MYSc 64..733 CDD:214580 266/712 (37%)
MYSc_Myo7 77..721 CDD:276832 255/687 (37%)
MyTH4 <1138..1245 CDD:214535
B41 1251..1467 CDD:214604
FERM_B-lobe 1355..1439 CDD:271216
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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