DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND5 and ND2

DIOPT Version :9

Sequence 1:YP_003024036.1 Gene:ND5 / 4540 HGNCID:7461 Length:603 Species:Homo sapiens
Sequence 2:YP_009047266.1 Gene:ND2 / 19893529 FlyBaseID:FBgn0013680 Length:341 Species:Drosophila melanogaster


Alignment Length:367 Identity:81/367 - (22%)
Similarity:165/367 - (44%) Gaps:58/367 - (15%)


- Green bases have known domain annotations that are detailed below.


Human   120 YLLIFLITMLILVTANNLFQLFIGWEGVGIMSFL-LISWWYARADANT-----AAIQAILYNRIG 178
            ::.|.:|..||.||:|:....::|.| :.::||: |:|      |.|.     |:::..|...:.
  Fly    10 FITIMIIGTLITVTSNSWLGAWMGLE-INLLSFIPLLS------DNNNLMSTEASLKYFLTQVLA 67

Human   179 DIGFILALAWFILHSNSWDPQQMALLN--ANPSLTPLLGLLLAAAGKSAQLGLHPWLPSAMEGPT 241
            ....:.:....:|.:|         :|  .|.|.|.:: ::.|...||.....|.|.|:.|||.|
  Fly    68 STVLLFSSILLMLKNN---------MNNEINESFTSMI-IMSALLLKSGAAPFHFWFPNMMEGLT 122

Human   242 PVSALLHSSTMVVAGIFLLIRFHPLAENSPLIQTLTLCLGAITTLFAAVCALTQNDIKKIVAFST 306
            .::||:..:...:|.:.|:...:        |:.|.|....::.:..|:..|.|..::|::|||:
  Fly   123 WMNALMLMTWQKIAPLMLISYLN--------IKYLLLISVILSVIIGAIGGLNQTSLRKLMAFSS 179

Human   307 SSQLGLMMVTIGINQPHLAFLHICTHAFFKAML-FMCSGSIIHNLNNEQDIRKMGGLLKTMPLTS 370
            .:.||.|:.::.|:: .:..::...::|...:| ||.:...:.:||      ::........:..
  Fly   180 INHLGWMLSSLMISE-SIWLIYFFFYSFLSFVLTFMFNIFKLFHLN------QLFSWFVNSKILK 237

Human   371 TSLTIGSLALAGMPFLTGFYSKDHIIETANMSYTNAWALSITLIATSLTSAYSTRMILLTLTGQP 435
            .:|.:..|:|.|:|...||..|..:|:...:. ...:.|::.:::|.:|..:..|:.....    
  Fly   238 FTLFMNFLSLGGLPPFLGFLPKWLVIQQLTLC-NQYFMLTLMMMSTLITLFFYLRICYSAF---- 297

Human   436 RFPTLTNINENNPTL---LNPIKR-----LAAGSLFAGFLIT 469
                :.|..|||..:   :|.|..     :...|:|..|||:
  Fly   298 ----MMNYFENNWIMKMNMNSINYNMYMIMTFFSIFGLFLIS 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND5YP_003024036.1 ND5 16..594 CDD:177170 81/367 (22%)
ND2YP_009047266.1 ND2 1..340 CDD:214442 81/367 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1007
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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