DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TrpRS and Wars

DIOPT Version :9

Sequence 1:NP_524826.1 Gene:TrpRS / 45399 FlyBaseID:FBgn0010803 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_035840.3 Gene:Wars / 22375 MGIID:104630 Length:481 Species:Mus musculus


Alignment Length:411 Identity:257/411 - (62%)
Similarity:322/411 - (78%) Gaps:4/411 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GKPDAEPVETGTDAQAQEGATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEK 83
            |.|...|. .|.:..:.  ||..:||.||||.|.:|:..|:||||||.:|||||||:|||.|.|:
Mouse    65 GCPPGNPT-AGRNCDSD--ATKASEDFVDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELINRIER 126

  Fly    84 ITGKPAHHFIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETF 148
            .||:..|.|:|||:||||||::.||...|..|||||||||||||.::|:|||||||.|||||:.|
Mouse   127 ATGQRPHRFLRRGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFTKWLQDVF 191

  Fly   149 DVPLVIQLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNII 213
            :||||||::||||.|||||.:|.|.....||||||:|.|||:||||||::||::|:.|..|:|::
Mouse   192 NVPLVIQMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYRNVV 256

  Fly   214 RIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGNR-KVHCLIPCAIDQDPYF 277
            :|||.||||||||||||.|||.||||.|||.||||:.|::||.||.:| .:.|||||||||||||
Mouse   257 KIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDRTDIQCLIPCAIDQDPYF 321

  Fly   278 RMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAVYLTDTPKQIKNKINKYAFSGGRV 342
            |||||||||:|.||.||:|||||||||||:|||||||.||:::||||.||||:|:||:||||||.
Mouse   322 RMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKSKVNKHAFSGGRD 386

  Fly   343 SVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEVRVAYSKGEMLTGEIKKLAVETLTPIVEQHQA 407
            :|||||:.||..|||||:..|.||||||.:||::|..|:.|.|||||:||..::.|.|::.:|||
Mouse   387 TVEEHRQFGGNCEVDVSFMYLTFFLEDDDRLEQIRKDYTSGAMLTGELKKTLIDVLQPLIAEHQA 451

  Fly   408 ARKLITDEVLDKYFELRPLKF 428
            .||.:|:|.:.::...|.|.|
Mouse   452 RRKAVTEETVKEFMTPRQLSF 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRSNP_524826.1 PLN02486 45..426 CDD:178104 247/381 (65%)
trpS 115..422 CDD:272975 205/307 (67%)
WarsNP_035840.3 WEPRS_RNA 16..65 CDD:238473 257/411 (63%)
PLN02486 89..470 CDD:178104 247/380 (65%)
'HIGH' region 168..177 4/8 (50%)
'KMSKS' region 353..357 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838139
Domainoid 1 1.000 414 1.000 Domainoid score I673
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3084
Inparanoid 1 1.050 530 1.000 Inparanoid score I1207
Isobase 1 0.950 - 0 Normalized mean entropy S449
OMA 1 1.010 - - QHG62151
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003947
OrthoInspector 1 1.000 - - oto93068
orthoMCL 1 0.900 - - OOG6_101168
Panther 1 1.100 - - LDO PTHR10055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1459
SonicParanoid 1 1.000 - - X3247
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.880

Return to query results.
Submit another query.