DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrpRS and wars-1

DIOPT Version :9

Sequence 1:NP_524826.1 Gene:TrpRS / 45399 FlyBaseID:FBgn0010803 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_507683.2 Gene:wars-1 / 180231 WormBaseID:WBGene00006945 Length:417 Species:Caenorhabditis elegans


Alignment Length:429 Identity:250/429 - (58%)
Similarity:315/429 - (73%) Gaps:15/429 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADTKETVVEGVEALTLNGKPDAEPVETGTDAQAQEGATAPTEDVVDPWNVASSNDAGVDYDKLI 65
            ||...|.|...:|.|.:||            ..|..|.....||.|.||.|.::...|:||||||
 Worm     1 MAAPAEQVAAEIENLKVNG------------GAAGGGVQEDEEDRVTPWEVTTTKATGIDYDKLI 53

  Fly    66 KRFGSSKIDEELIARFEKITGKPAHHFIRRGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSL 130
            .:||..|:|||:|||||::||..|...:||||||:||||..||..:|||||||||||||.|||||
 Worm    54 VKFGCRKLDEEIIARFERVTGHKASPMLRRGMFFAHRDLTAILDRKEQGKPFYLYTGRGASSGSL 118

  Fly   131 HVGHLVPFIMTKWLQETFDVPLVIQLTDDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFI 195
            |:|||||||.||||||.||||||||:|||||.||||:||::|.|:.|||.|||:::|||..||||
 Worm   119 HLGHLVPFIFTKWLQEVFDVPLVIQMTDDEKFLWKDMKVDEAKKMARENMKDIISVGFDPTKTFI 183

  Fly   196 FNNLEFVGKCPAMYQNIIRIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFGN 260
            |||.:::  ||..|:||::|.|.|..||.:.||||...|.:||..|||.:|||..:|:||.|||.
 Worm   184 FNNFDYM--CPPFYENIVKIWKVVNTNQARAIFGFTPEDCLGKAAFPAVEAAPCFASSFPQIFGK 246

  Fly   261 RK-VHCLIPCAIDQDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAVYLTDT 324
            |. :.|||||||||||:|||||||||||...|.:||.|||.|||.||:||||||:.|:.::|:||
 Worm   247 RNDIPCLIPCAIDQDPFFRMTRDVAPRLKASKPSLIFSTFLPALTGAQTKMSASEPNTCIFLSDT 311

  Fly   325 PKQIKNKINKYAFSGGRVSVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEVRVAYSKGEMLTGE 389
            .|||||||||||||||:.:|:|||:.||..:||:|||.|:|||:||.||.|:|..|:|||||:||
 Worm   312 AKQIKNKINKYAFSGGQQTVQEHREKGGNCDVDISYQFLRFFLDDDEKLAEIRENYTKGEMLSGE 376

  Fly   390 IKKLAVETLTPIVEQHQAARKLITDEVLDKYFELRPLKF 428
            :|.||.:.:..||.:.|..|||:|||.::::.::|||.:
 Worm   377 LKALATQKVQEIVLEMQERRKLVTDETVEEFVKVRPLAY 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpRSNP_524826.1 PLN02486 45..426 CDD:178104 236/381 (62%)
trpS 115..422 CDD:272975 195/307 (64%)
wars-1NP_507683.2 PLN02486 34..414 CDD:178104 237/381 (62%)
trpS 103..416 CDD:272975 198/315 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159997
Domainoid 1 1.000 94 1.000 Domainoid score I4757
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3084
Inparanoid 1 1.050 503 1.000 Inparanoid score I738
Isobase 1 0.950 - 0 Normalized mean entropy S449
OMA 1 1.010 - - QHG62151
OrthoDB 1 1.010 - - D300066at33208
OrthoFinder 1 1.000 - - FOG0003947
OrthoInspector 1 1.000 - - oto18831
orthoMCL 1 0.900 - - OOG6_101168
Panther 1 1.100 - - LDO PTHR10055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1459
SonicParanoid 1 1.000 - - X3247
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.890

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