DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh-III and Aldh9a1

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_071609.2 Gene:Aldh9a1 / 64040 RGDID:68409 Length:497 Species:Rattus norvegicus


Alignment Length:535 Identity:141/535 - (26%)
Similarity:220/535 - (41%) Gaps:101/535 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PINAAGDRPITTVINIEP----------EPETESPIGIFTSQPESQQQQPEQLQSESESDRMANF 70
            |:|..|.      ..:||          ||.|...|..|....|.:                .|.
  Rat    11 PLNYRGG------ARVEPVDASGTEKAFEPATGREIATFKCSGEKE----------------VNL 53

  Fly    71 DDTLQRARLAFSSGKTRNVSFRRKQLENLLRCYEEHENEIISALEADLRRPK---QESLIVETEF 132
              .::.|:.||.....::...|.:.|....|..:|..:||  |:...:...|   :..|.|:|.:
  Rat    54 --AVENAKAAFKIWSKKSGLERCQVLLEAARIIKERRDEI--AIMETINNGKSIFEARLDVDTSW 114

  Fly   133 MKNDI----------RHILFQLDEWVQSEKPPKSFVNMMDDVQIYNDPFGVVLVIGAWNYPLQLL 187
            ...:.          .||          :.|..||      .....:|.||.|.|||||||.|:.
  Rat   115 QCLEYYAGLAASMAGEHI----------QLPGGSF------GYTRREPLGVCLGIGAWNYPFQIA 163

  Fly   188 LVPVASAIAAGNCVVIKPSEIAANCAKFIADVIPKY-LDNDCYPVVCGGPSETAELLNQRFDY-- 249
            ....|.|:|.||.::.|||......|..:|::..|. ..|..:.||.|| :.|.:.|.|..|.  
  Rat   164 CWKSAPALACGNAMIFKPSPFTPVSALLLAEIYTKAGAPNGLFNVVQGG-AATGQFLCQHRDVAK 227

  Fly   250 IFYTGSTRVGKIIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWGKLINCGQTCIAPD 314
            :.:|||...|..|...|.|.:.|.|||||||||..|....:|:.|||..|....:..||.|....
  Rat   228 VSFTGSVPTGMKIMEMAAKGIKPITLELGGKSPLIIFSDCNMKNAVKGALLANFLTQGQVCCNGT 292

  Fly   315 YILCSKEVQEKFIVEAKDVLKEW----YGENIQSSPDLSRVINANNFQRLLGLMKSGR-----VA 370
            .:...||:.:.|   .|:|:::.    .|:.:.....:..:|||.:.:|:||.::|.:     |.
  Rat   293 RVFVQKEIADAF---TKEVVRQTQRIKIGDPLLEDTRMGPLINAPHLERVLGFVRSAKEQGATVL 354

  Fly   371 VGGNYDASE-------RFIEPTILVDVKETDPIMEEEIFGPILPIFNVESAYDAIKFINAREKPL 428
            .||...|.|       .::.|.||.:..:....::||||||::.|...|:..:.::..|.....|
  Rat   355 CGGEPYAPEDPKLKHGYYMTPCILTNCTDDMTCVKEEIFGPVMSILTFETEAEVLERANDTTFGL 419

  Fly   429 VIYVFS----NSNKLVKEFRRSTTSGGFSSNETIMHCGVDVLPFGGVGMSGMGRYHGKYGFETFT 489
            ...||:    .::::..|.:..|.   :.:|..:...   .|||||...||.||.:|:...|.::
  Rat   420 AAGVFTRDIQRAHRVAAELQAGTC---YINNYNVSPV---ELPFGGYKKSGFGRENGRVTIEYYS 478

  Fly   490 HKKS-C--LGKDLSP 501
            ..|: |  :|...||
  Rat   479 QLKTVCVEMGDVESP 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 129/469 (28%)
Aldh9a1NP_071609.2 ALDH_F9_TMBADH 31..488 CDD:143409 133/502 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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