DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh-III and aldh3a2b

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001315147.1 Gene:aldh3a2b / 447920 ZFINID:ZDB-GENE-040912-103 Length:490 Species:Danio rerio


Alignment Length:490 Identity:230/490 - (46%)
Similarity:319/490 - (65%) Gaps:2/490 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 MANFDDTLQRARLAFSSGKTRNVSFRRKQLENLLRCYEEHENEIISALEADLRRPKQESLIVETE 131
            |:.....::|||.||.:|:::::.:|..||:||.|..:|.:.||..||:.||:|.:..:.:.||.
Zfish     1 MSREQKAVERARKAFFTGRSKSLEYRISQLKNLQRFMQERQKEIAEALKKDLKRSEFGTSLYETL 65

  Fly   132 FMKNDIRHILFQLDEWVQSEKPPKSFVNMMDDVQIYNDPFGVVLVIGAWNYPLQLLLVPVASAIA 196
            .::::|...|.:|.||.......||.:.:.|.|.|..:|.||||:|||||||..:.:.|:..|||
Zfish    66 GVESEINLALKKLKEWAAPRPVNKSLMTISDQVYIQPEPLGVVLIIGAWNYPWAVTVGPLVGAIA 130

  Fly   197 AGNCVVIKPSEIAANCAKFIADVIPKYLDNDCYPVVCGGPSETAELLNQRFDYIFYTGSTRVGKI 261
            |||..||||||::|:.:|.:.:.:|.|||.:.||||.||..||.|||.||||:|||||:..||||
Zfish   131 AGNAAVIKPSEVSAHTSKVMEEFLPLYLDKELYPVVTGGVKETQELLKQRFDHIFYTGNGMVGKI 195

  Fly   262 IHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKF 326
            |..||.|:||||||||||||||||||..|:..|.:||.|||..||||||||||||||...:|::.
Zfish   196 IMEAAAKHLTPTTLELGGKSPCYIDKDCDLTIACRRIAWGKYSNCGQTCIAPDYILCDPSIQDRV 260

  Fly   327 IVEAKDVLKEWYGENIQSSPDLSRVINANNFQRLLGLMKSGRVAVGGNYDASERFIEPTILVDVK 391
            |.|.|..:||:|.||.|..||..|:||..:|:||:.||:...:||.|.::.:|.:|.||:|.|||
Zfish   261 IEEIKKNIKEFYTENPQKCPDYGRIINQRHFKRLMSLMEGSSIAVSGEHNEAECYIAPTVLRDVK 325

  Fly   392 ETDPIMEEEIFGPILPIFNVESAYDAIKFINAREKPLVIYVFSNSNKLVKEFRRSTTSGGFSSNE 456
            ....:|:||||||:|||..|.|..:||||||.|:|||.:|:||:..||:......|:|||..:|:
Zfish   326 PDAKVMQEEIFGPLLPIVTVNSVDEAIKFINQRDKPLALYIFSSDKKLIDRMIAETSSGGLMAND 390

  Fly   457 TIMHCGVDVLPFGGVGMSGMGRYHGKYGFETFTHKKSCLGKDLSPLGEKLSSARYPPYSDRKGSL 521
            .:||..|..|||||||.|||||||||:||:..:|.:..|.|.|..  |.::..||||::..|...
Zfish   391 CLMHFSVSSLPFGGVGDSGMGRYHGKHGFDNLSHMRGVLLKQLKM--EAVNKMRYPPHTADKLGW 453

  Fly   522 LSFLLRKRRPLPNLHLSHVLAIGLGVGLTVLTNYY 556
            ..|.:.:.....:|....:||:.:.....::..|:
Zfish   454 ARFFIVRHVDFGSLGRMAMLALMVVFAAVIIQKYF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 223/442 (50%)
aldh3a2bNP_001315147.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 442 1.000 Domainoid score I516
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 457 1.000 Inparanoid score I1556
OMA 1 1.010 - - QHG62894
OrthoDB 1 1.010 - - D225045at33208
OrthoFinder 1 1.000 - - FOG0000656
OrthoInspector 1 1.000 - - otm25475
orthoMCL 1 0.900 - - OOG6_100557
Panther 1 1.100 - - O PTHR43570
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2145
SonicParanoid 1 1.000 - - X395
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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