DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh-III and CG17896

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_569845.2 Gene:CG17896 / 30995 FlyBaseID:FBgn0023537 Length:520 Species:Drosophila melanogaster


Alignment Length:529 Identity:123/529 - (23%)
Similarity:202/529 - (38%) Gaps:138/529 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ETESPIGIFTSQPESQQ---QQPEQLQSESESDRMANFDDTLQRARLAFSSGKTRNVSFRRKQLE 97
            |:::...|....|.:.|   :.|:..|:|.::        .|:..:.||.|...:::..|::.:.
  Fly    36 ESKTNEWIDVHDPATNQVVTRVPKATQAEMQA--------ALESNKKAFRSWSNQSILTRQQVMF 92

  Fly    98 NLLRCYEEHENEI-----------ISALEADLRRPKQESLIVETEFMKNDIRHIL----FQLDEW 147
            .|....:|:..|:           ::..|.|:.|..|   :||         |..    .|:.|.
  Fly    93 KLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQ---VVE---------HCCSIPSLQMGET 145

  Fly   148 VQSEKPPKSFVNMMDDVQIYN--DPFGVVLVIGAWNYP--LQLLLVPVASAIAAGNCVVIKPSEI 208
            |         .|:..|:..|:  .|.||...:..:|:|  :.|.:.||  ||..||.:::||||.
  Fly   146 V---------ANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPV--AITTGNTMLLKPSER 199

  Fly   209 A-------------ANCAKFIADVIPKYLDNDCYPVVCGGPSETAELLNQRFDYIFYTGSTRVGK 260
            .             |.|...:.:||  :..:|....:|..|...|         :.:.||.:.||
  Fly   200 VPGATMLLMELLNEAGCPPGVVNVI--HGQHDAVNFICDAPEIKA---------VSFVGSDQAGK 253

  Fly   261 IIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWGKLINCGQTCIA------------- 312
            .|:..|.|........:|.|:...|....:....:.::........||.|:|             
  Fly   254 YIYERAGKNGKRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDAQAW 318

  Fly   313 -PDYILCSKEVQEKFIVEAKDVLKEWYGENIQSSPDLSRVINANNFQRLLGLMKSG--------- 367
             ||.:    |..:|..|.|..|          ...|:..||:|.:.||:..|::||         
  Fly   319 IPDLV----ERAQKLKVNAGHV----------PGTDVGPVISAASRQRINDLIESGVKEGAKLIL 369

  Fly   368 ---RVAVGGNYDASERFIEPTILVDVKETDPIMEEEIFGPILPIFNVESAYDAIKFINAREKPLV 429
               ::.|.|..|.  .|:.||||.||..:.....||||||:|.|...::..|||..:||......
  Fly   370 DGRKITVPGYEDG--YFVGPTILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNG 432

  Fly   430 IYVFSNSNKLVKEFRRSTTSGGFSSNETIMHCGVDV-----LP-FGGVGMSGMGR----YHGKYG 484
            ..||:.:....::|.....:|         ..||:|     || |...|..|..|    ::||.|
  Fly   433 TAVFTTNGAAARKFVNEIDAG---------QVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQG 488

  Fly   485 FETFTHKKS 493
            .:.:|..|:
  Fly   489 IKFYTQTKT 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 116/490 (24%)
CG17896NP_569845.2 ALDH_F6_MMSDH 26..502 CDD:143404 123/529 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454129
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.