DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh-III and Aldh1a1

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_038949786.1 Gene:Aldh1a1 / 24188 RGDID:2087 Length:520 Species:Rattus norvegicus


Alignment Length:484 Identity:135/484 - (27%)
Similarity:210/484 - (43%) Gaps:84/484 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EQLQSESESDRMANFDDTLQRARLAFSSG---KTRNVSFRRKQLENLLRCYEEHENEIISALEAD 117
            |::....|....|:.|..::.||.||..|   :|.:.| .|.:|.|.|....|.:..:::.:|| 
  Rat    65 EEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDAS-ERGRLLNKLADLMERDRLLLATIEA- 127

  Fly   118 LRRPKQESLIVETEFMKNDIRHILFQLDEWVQSEKPPKSFVNMMD---------DVQIY----ND 169
                     |...:...|      ..|.:...|.|..|......|         |..|:    .:
  Rat   128 ---------INGGKVFAN------AYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRRE 177

  Fly   170 PFGVVLVIGAWNYPLQLLLVPVASAIAAGNCVVIKPSE----IAANCAKFI---------ADVIP 221
            |.||...|..||:||.:.:..:..|::.||.||:||:|    .|.:.|..|         .:::|
  Rat   178 PIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVP 242

  Fly   222 KYLDNDCYPVVCGGPSETAELLNQR-FDYIFYTGSTRVGKIIHAAANK-YLTPTTLELGGKSPCY 284
            .|           ||:..|.:.:.. .|.:.:||||:|||:|..||.| .|...||||||||||.
  Rat   243 GY-----------GPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCI 296

  Fly   285 IDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEA-----KDVLKEWYGENIQS 344
            :....|:..||:....|...:.||.|:|...|...:.|.::|:.::     |.||.....:.|..
  Rat   297 VFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQ 361

  Fly   345 SPDLSRVINANNFQRLLGLMKSGR------VAVGGNYDASERFIEPTILVDVKETDPIMEEEIFG 403
            .|.    |:.....::|.|::||:      ...||.:.....|::||:..:|.:...|.:|||||
  Rat   362 GPQ----IDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFG 422

  Fly   404 PILPIFNVESAYDAIKFINAREKPLVIYVFSNSNKLVKEFRRS-TTSGGFSSNETIMHCGVDV-- 465
            |:..|...:|..|.||..|.....|...||:      |:..|: |.|....:....::|.:.:  
  Rat   423 PVQQIMKFKSIDDVIKRANNTTYGLAAGVFT------KDLDRAITVSSALQAGVVWVNCYMILSA 481

  Fly   466 -LPFGGVGMSGMGRYHGKYGFETFTHKKS 493
             .||||..|||.||..|::|...:|..|:
  Rat   482 QCPFGGFKMSGNGRELGEHGLYEYTELKT 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 131/468 (28%)
Aldh1a1XP_038949786.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 135/484 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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