DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh-III and Aldh1l2

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_705771.2 Gene:Aldh1l2 / 216188 MGIID:2444680 Length:923 Species:Mus musculus


Alignment Length:469 Identity:123/469 - (26%)
Similarity:208/469 - (44%) Gaps:71/469 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 MANFDDTLQRARLAFSSGK--TRNVSFRRKQLENLLRCYEEHENEIISALEADLRRPKQESLIVE 129
            :|:.|..:..|:.||.:|:  ..|...|.:.:..|....||::.| ::.:||      .:|..|.
Mouse   479 LADVDRAVAAAKDAFENGEWGRMNARDRGRLMYRLADLMEENQEE-LATIEA------LDSGAVY 536

  Fly   130 TEFMKNDIRHILFQLDEWVQSEKPPKSFVNMMDDVQ-----------IYN------DPFGVVLVI 177
            |..:|.   ||...:..:       :.|....|.:|           .||      :|.|...:|
Mouse   537 TLALKT---HIGMSVQTF-------RYFAGWCDKIQGSTIPINQARPNYNLTFTKKEPLGACAII 591

  Fly   178 GAWNYPLQLLLVPVASAIAAGNCVVIKPSEIAANCAKFIADV-----IPKYLDNDCYPVVCGGPS 237
            ..|||||.:|....|:.:||||.:|:||:::....|...|::     .||.:.|    ::.|...
Mouse   592 IPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELTVKAGFPKGVIN----IIPGSGG 652

  Fly   238 ETAELLNQRFDY--IFYTGSTRVGK-IIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRIL 299
            ...:.|:|..|.  :.:||||.||| |:.:.|...|...:||||||||..|....|:..||:..:
Mouse   653 VAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSNLKKVSLELGGKSPLIIFSDCDLEKAVRMGM 717

  Fly   300 WGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEW-YGENIQSSPDLSRVINANNFQRLL-- 361
            .....|.|:.|||...:...:.:.::|:....:.:|:. .|:.:..|.|.....:..:.::||  
Mouse   718 GAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHRAHLEKLLQY 782

  Fly   362 ---GLMKSGRVAVGGNYDASER---FIEPTILVDVKETDPIMEEEIFGPILPIFNVESA-YDAI- 418
               |:.:...:..||.  ..:|   |:|||:...|::...:.:||.||||:.|...::. .|.: 
Mouse   783 CETGVQEGATLVYGGR--QVQRPGFFMEPTVFTGVEDHMYLAKEESFGPIMVISKFQNGDIDGVL 845

  Fly   419 KFINAREKPLVIYVFS---NSNKLVKEFRRSTTSGGFSSNETIMHCGVDV-LPFGGVGMSGMGRY 479
            :..|..|..|...||:   |....|.:...:.|....:.|:|      || .||||:..||.|:.
Mouse   846 QRANNTEYGLASGVFTRDINKAMYVSDKLEAGTVFINTYNKT------DVAAPFGGMKQSGFGKD 904

  Fly   480 HGKYGFETFTHKKS 493
            .|:.....:...|:
Mouse   905 LGEEALNEYLKIKT 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 121/464 (26%)
Aldh1l2NP_705771.2 Fmt 22..326 CDD:223301
FMT_core_FDH_N 23..225 CDD:187716
GART 23..225
FDH_Hydrolase_C 228..327 CDD:187731
PP-binding 346..410 CDD:278949
ALDH_F1L_FTFDH 438..923 CDD:143458 123/469 (26%)
Aldehyde dehydrogenase 438..923 123/469 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.