DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh-III and alh-11

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001379574.1 Gene:alh-11 / 185679 WormBaseID:WBGene00000117 Length:687 Species:Caenorhabditis elegans


Alignment Length:345 Identity:105/345 - (30%)
Similarity:165/345 - (47%) Gaps:30/345 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 PFGVVLVIGAWNYPLQLLLVPVASAIAAGNCVVIKPSEIAANCAKFIADVIPKY-LDNDCYPVVC 233
            |.|||..|||||||:|......|.|:|.||.|:.|||.::...|..:|:::... |.:..:.|: 
 Worm   340 PVGVVAAIGAWNYPIQTCSWKTAPALACGNAVIYKPSPLSPVTALILAEILKSAGLPDGVFNVI- 403

  Fly   234 GGPSETAELL--NQRFDYIFYTGSTRVG-KIIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAV 295
            .|.:|||:.|  :.....:.:|||...| ||:.|.|::.:.|.||||||||...:....|:.:||
 Worm   404 QGDAETAQDLIHHDGVSKVSFTGSIPTGKKIMKACADRNIKPVTLELGGKSALIVFDDADIDSAV 468

  Fly   296 KRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKD-VLKEWYGENIQSSPDLSRVINANNFQR 359
            ...:.....:.||.|.....:|..|.|.::|..:..| ..|...|:.::....:...|:|.:..:
 Worm   469 SCAMMANFYSQGQVCSNASKVLVHKSVLKEFTKKLVDHTQKMKIGDPLKEDTQVGSHISAEHRNK 533

  Fly   360 LLGLMKSG------------RVAVGGNYDASERFIEPTILVDVKETDPIMEEEIFGPILPIFNVE 412
            :.|.:.:.            ||||.|..:..  ::.|.||..:.....:..|||||.:|.|...:
 Worm   534 VEGYISTAIAEGATKLCGGDRVAVHGLENGF--YLSPCILTGITPKMTVYREEIFGSVLLIIPFD 596

  Fly   413 SAYDAIKFINAREKPLVIYVFSNSNKLVKEFRRS-TTSGGFSSNETIMHCGVDV---LPFGGVGM 473
            :..:|||..|..:..|.      :..:.|:..|| ..|...::....::...||   :||||||.
 Worm   597 TEDEAIKIANDTDMGLA------AGLVTKDLSRSYRVSEQLNAGNVYVNTYNDVSPLVPFGGVGE 655

  Fly   474 SGMGRYHGKYGFETFTHKKS 493
            ||.||.:|....|.:||.||
 Worm   656 SGFGRENGTAVLEHYTHLKS 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 105/345 (30%)
alh-11NP_001379574.1 NLPC_P60 <30..131 CDD:419716
ALDH_F9_TMBADH 225..681 CDD:143409 105/345 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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