DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh-III and alh-3

DIOPT Version :10

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_502054.2 Gene:alh-3 / 177999 WormBaseID:WBGene00000109 Length:908 Species:Caenorhabditis elegans


Alignment Length:535 Identity:137/535 - (25%)
Similarity:222/535 - (41%) Gaps:107/535 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PHPE-ANGAPINAAGDRPITTVINIEPEPETESPIGIFTSQPESQQQQPEQLQSESESDRMANFD 71
            ||.: .:|..:.::..|...|:     .|.||.||                  .|.....:|:.|
 Worm   427 PHDQFIDGKFVGSSDGRTFKTI-----NPATEKPI------------------CELPLATVADVD 468

  Fly    72 DTLQRARLAFSSGKTRNVSFRR--KQLENLLRCYEEHENEI--ISALEADLRRPKQESLIVETEF 132
            ..::.|:.||..|:.|.:|.|.  |:|..|....|||:.|:  :.:|:|.         .|.|..
 Worm   469 RAVRAAKKAFERGEWRQMSARERGKRLYKLAELMEEHKEELATLESLDAG---------AVYTLA 524

  Fly   133 MKNDIRHILFQLDEWVQSEKPPKSFVNMMDDVQ-----IYN------------DPFGVVLVIGAW 180
            :|.   |:...:|.|       :.|....|.:|     |.|            :|.|||.:|..|
 Worm   525 LKT---HVGMSIDVW-------RYFAGWCDKIQGKTIPISNARPNKNLCLTLREPIGVVGLITPW 579

  Fly   181 NYPLQLLLVPVASAIAAGNCVVIKPSEIAANCAKFIADV-----IPKYLDNDCYPVVCGGPSETA 240
            ||||.:|...:|:.:||||.||.||:::....|...|::     ||..:.|    :|.|..|...
 Worm   580 NYPLMMLSWKMAACLAAGNTVVHKPAQVTPLTALKFAELSVLAGIPPGVIN----IVTGSGSLVG 640

  Fly   241 ELLNQRFDY--IFYTGSTRVG-KIIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWGK 302
            ..|....|.  |.:||||.:| .::.:.|...:...:||||||||..|....|:..|||:.....
 Worm   641 NRLTAHPDVRKIGFTGSTEIGATVMESCAKSNIKKVSLELGGKSPLIIFADADLEKAVKQACGAV 705

  Fly   303 LINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEW-YGENIQSSPDLSRVINANNFQRLLGLMK- 365
            ..|.|:.|||...:..:|.:.:.|:.:..:..|:: .|:.:..|.......:..:..:|:..:: 
 Worm   706 FFNKGENCIAAGRVFIAKSIHDDFVKKLVEEAKQYQIGDPLDRSTAHGPQNHLAHLNKLVEYVEK 770

  Fly   366 ----SGRVAVGG-NYDASERFIEPTILVDVKETDPIMEEEIFGPILPI--FNVESAYDAIKFINA 423
                ..:|.||| ..:....:..||||.::.:.:....||.||||:.:  |:.:...|.::..|.
 Worm   771 AVAGGAKVEVGGKRLEREGLYFPPTILSNIDDENFAASEESFGPIMCVSSFDDDDIEDVLRRAND 835

  Fly   424 REKPLVIYVFSNSNKLVKEFRRSTTSGGFSSNETIMHCG---------VDV-LPFGGVGMSGMGR 478
            .|..|...||:..:.  |..|.:..          :|.|         .|| .||||...||.|:
 Worm   836 TEFGLAAGVFTRDSS--KSLRVAEA----------LHAGTVFVNTYQKTDVAAPFGGFKQSGFGK 888

  Fly   479 YHGKYGFETFTHKKS 493
            ..|:.....:...|:
 Worm   889 DMGEEALNEYLVTKT 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 124/470 (26%)
alh-3NP_502054.2 FMT_core_FDH_N 1..209 CDD:187716
FDH_Hydrolase_C 214..315 CDD:187731
PP-binding 335..393 CDD:425746
ALDH-SF 423..908 CDD:448367 137/535 (26%)
Blue background indicates that the domain is not in the aligned region.

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