DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh-III and Aldh1a1

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001348432.1 Gene:Aldh1a1 / 11668 MGIID:1353450 Length:501 Species:Mus musculus


Alignment Length:476 Identity:131/476 - (27%)
Similarity:213/476 - (44%) Gaps:68/476 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EQLQSESESDRMANFDDTLQRARLAFSSG---KTRNVSFRRKQLENLLRCYEEHENEIISALEAD 117
            |::....|....|:.|..::.||.||..|   :|.:.| .|.:|.|.|....|.:..:::.:|| 
Mouse    46 EEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDAS-ERGRLLNKLADLMERDRLLLATMEA- 108

  Fly   118 LRRPKQESLIVETEFMKNDIRHILFQLD---EWVQSEKPPKSFVNMMDDVQIY--NDPFGVVLVI 177
            |...|     |......:|:...:..|.   .|  ::|.....:....|:..|  .:|.||...|
Mouse   109 LNGGK-----VFANAYLSDLGGCIKALKYCAGW--ADKIHGQTIPSDGDIFTYTRREPIGVCGQI 166

  Fly   178 GAWNYPLQLLLVPVASAIAAGNCVVIKPSE----IAANCAKFI---------ADVIPKYLDNDCY 229
            ..||:|:.:.:..:..|::.||.||:||:|    .|.:.|..|         .:::|.|      
Mouse   167 IPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGY------ 225

  Fly   230 PVVCGGPSETAELLNQR-FDYIFYTGSTRVGKIIHAAANK-YLTPTTLELGGKSPCYIDKSVDMR 292
                 ||:..|.:.:.. .|.:.:||||:|||:|..||.| .|...||||||||||.:....|:.
Mouse   226 -----GPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLD 285

  Fly   293 TAVKRILWGKLINCGQTCIAPDYILCSKEVQEKFIVEAKDVLKEWYGEN-----IQSSPDLSRVI 352
            .||:....|...:.||.|:|...|...:.|.::|:..:.:..|::...|     |...|.    |
Mouse   286 IAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQ----I 346

  Fly   353 NANNFQRLLGLMKSGR------VAVGGNYDASERFIEPTILVDVKETDPIMEEEIFGPILPIFNV 411
            :.....::|.|::||:      ...||.:.....|::||:..:|.:...|.:||||||:..|...
Mouse   347 DKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKF 411

  Fly   412 ESAYDAIKFINAREKPLVIYVFSNS-NKLVKEFRRSTTSGGFSSNETIMHCGVDV---LPFGGVG 472
            :|..|.||..|.....|...:|:.. :|.:      |.|....:....::|.:.:   .||||..
Mouse   412 KSVDDVIKRANNTTYGLAAGLFTKDLDKAI------TVSSALQAGVVWVNCYMMLSAQCPFGGFK 470

  Fly   473 MSGMGRYHGKYGFETFTHKKS 493
            |||.||..|::|...:|..|:
Mouse   471 MSGNGRELGEHGLYEYTELKT 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 127/460 (28%)
Aldh1a1NP_001348432.1 ALDH_F1AB_F2_RALDH1 15..495 CDD:143459 131/476 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.