DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aldh-III and Aldh1l1

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001343341.1 Gene:Aldh1l1 / 107747 MGIID:1340024 Length:902 Species:Mus musculus


Alignment Length:470 Identity:125/470 - (26%)
Similarity:204/470 - (43%) Gaps:71/470 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RMANFDDTLQRARLAFSSG--KTRNVSFRRKQLENLLRCYEEHENEI--ISALEADLRRPKQESL 126
            ::::.|..:..|:.||.:|  ...|...|.:.|..|....|:|:.|:  |.||:|.         
Mouse   457 QVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADLMEQHQEELATIEALDAG--------- 512

  Fly   127 IVETEFMKNDIRHILFQLDEWVQSEKPPKSFVNMMDDVQ-----------------IYNDPFGVV 174
            .|.|..:|.   |:...:..:       :.|....|.:|                 ...:|.||.
Mouse   513 AVYTLALKT---HVGMSIQTF-------RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVC 567

  Fly   175 LVIGAWNYPLQLLLVPVASAIAAGNCVVIKPSEIAANCAKFIADV-----IPKYLDNDCYPVVCG 234
            .::..|||||.:|....|:.:||||.|||||:::....|...|::     |||.:.|    ::.|
Mouse   568 GIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN----ILPG 628

  Fly   235 GPSETAELLNQRFDY--IFYTGSTRVGK-IIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVK 296
            ..|...:.|:...|.  |.:||||.||| |:.:.|...:...:||||||||..|....|:..||:
Mouse   629 SGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQ 693

  Fly   297 RILWGKLINCGQTCIAPDYILCSKEVQEKFIVE-AKDVLKEWYGENIQSSPDLSRVINANNFQRL 360
            ..:.....|.|:.|||...:.....:.::|:.: .::|.|...|..:....:.....:..:.::|
Mouse   694 MGMSSVFFNKGENCIAAGRLFVEDSIHDQFVQKVVEEVGKMKIGNPLDRDTNHGPQNHEAHLRKL 758

  Fly   361 L-----GLMKSGRVAVGGN-YDASERFIEPTILVDVKETDPIMEEEIFGPILPIFN-VESAYDAI 418
            :     |:.:...:..||| ......|.:||:..||::...|.:||.||||:.|.. .:...||:
Mouse   759 VEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAV 823

  Fly   419 -KFINAREKPLVIYVFS---NSNKLVKEFRRSTTSGGFSSNETIMHCGVDV-LPFGGVGMSGMGR 478
             ...||.|..|...||:   |....|.:..::.|....:.|:|      || .||||...||.|:
Mouse   824 LSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKT------DVAAPFGGFKQSGFGK 882

  Fly   479 YHGKYGFETFTHKKS 493
            ..|:.....:...|:
Mouse   883 DLGEAALNEYLRIKT 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 124/464 (27%)
Aldh1l1NP_001343341.1 FMT_core_FDH_N 1..203 CDD:187716
GART 1..203
Substrate binding. /evidence=ECO:0000250 88..90
FDH_Hydrolase_C 206..306 CDD:187731
PP-binding 325..391 CDD:306928
ALDH_F1L_FTFDH 417..902 CDD:143458 125/470 (27%)
Aldehyde dehydrogenase 417..902 125/470 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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