DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aldh-III and aldh1b1

DIOPT Version :9

Sequence 1:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_004910950.1 Gene:aldh1b1 / 100498540 XenbaseID:XB-GENE-1013740 Length:517 Species:Xenopus tropicalis


Alignment Length:540 Identity:148/540 - (27%)
Similarity:226/540 - (41%) Gaps:90/540 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FDNAIKPHPEANGAPI-----------NAAGDRPITTVINIEPEPETESPIGIFTSQPESQQQQP 55
            |..||.|.|.:|....           :|...|...||     :|.|                 .
 Frog    20 FSTAIIPKPLSNPEVFYTKLFINNEWRDAVSGRRFPTV-----DPCT-----------------G 62

  Fly    56 EQLQSESESDRMANFDDTLQRARLAFSSG---KTRNVSFRRKQLENLLRCYEEHENEIISALEAD 117
            |.:...:|:|: |:.|..::.||.||..|   ::.:.|.|.:.|..|....|..:..:.|....|
 Frog    63 EVITHVAEADK-ADIDAAVKAAREAFKQGSPWRSMDASQRGQLLHRLADLIERDKIYLASLETMD 126

  Fly   118 LRRPKQESLIVETEFMKNDIRHILFQLDEWVQSEKPPKSFVNMMDD---VQIYNDPFGVVLVIGA 179
            ..:|..:|..::...:....|:.....|: |..:..|      :|.   ....::|.||...|..
 Frog   127 NGKPFADSFAIDLSTVVKVYRYYAGFADK-VHGKTIP------LDGNYFCYTRHEPVGVCGQIIP 184

  Fly   180 WNYPLQLLLVPVASAIAAGNCVVIKPSEIAANCAKFIADVIPKYLDNDCYP-----VVCG-GPSE 238
            ||:||.:....:..|:|.||.||:|.:|.....|.:||.:|.:    ..||     ::.| ||:.
 Frog   185 WNFPLVMQGWKLGPALATGNTVVMKVAEQTPLSALYIASLIKE----AGYPPGVVNILTGFGPTA 245

  Fly   239 TAELL-NQRFDYIFYTGSTRVGKIIH-AAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWG 301
            .|.|. :...|.|.:||||.||::|. ||.:..|...||||||||||.:....|:..||::....
 Frog   246 GAALAQHMDVDKIAFTGSTEVGRLIQKAAGSTNLKRVTLELGGKSPCIVMADADLEQAVEQCHEA 310

  Fly   302 KLINCGQTCIAPDYILCSKEVQEKFI---VEAKDVLKEWYGENIQSSPDLSRVINANNFQRLLGL 363
            ...|.||.|.|.......:.|.::|:   ||...:.|  .|............||...|.::||.
 Frog   311 LFFNMGQCCAAGSRTFVEENVYDEFLERTVEKAKLRK--VGNPFDLDTKHGPQINKEQFDKILGY 373

  Fly   364 MKSGR------VAVGGNYDASERFIEPTILVDVKETDPIMEEEIFGPILPIFNVESAYDAIKFIN 422
            :|||:      :..|..|.....||:||:..:|::...|..||||||:.|:|..:|..:.|:..|
 Frog   374 IKSGKTEGAKLMCGGERYGDKGFFIKPTVFANVQDNMKIAREEIFGPVQPVFKFKSIKEVIERAN 438

  Fly   423 AREKPLVIYVFS----NSNKLVKEFRRSTTSGGFSSNETIMHCGVDVLPFGGVGMSGMGRYHGKY 483
            .....|...:|:    .:..|.:..|..|.   :.:...|:.|..   ||||...||.||..|:.
 Frog   439 NTSYGLAAGIFTRDLDKAMLLTQALRAGTV---WVNTYNIVTCQT---PFGGFKESGNGRELGED 497

  Fly   484 GFETFT----------HKKS 493
            |.:.:|          ||||
 Frog   498 GLKAYTEVKTVTMKISHKKS 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 131/459 (29%)
aldh1b1XP_004910950.1 ALDH_F1AB_F2_RALDH1 31..511 CDD:143459 139/521 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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