DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and lbx1b

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001156784.1 Gene:lbx1b / 793810 ZFINID:ZDB-GENE-050309-27 Length:265 Species:Danio rerio


Alignment Length:146 Identity:44/146 - (30%)
Similarity:65/146 - (44%) Gaps:24/146 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKR-MQQE 364
            :|.::.||||:..||.:||..|....|:..|:|.|:|..|.||..||..||||||.|.|| :::.
Zfish   119 KKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLEEM 183

  Fly   365 GGDGSDTKSN--------------KGSSSGGGGGGDGEDDAKHDGSQHSYEDAE----DPED--E 409
            ..|....:|.              :..::.|..|..|...:...|  |.|:...    .|..  .
Zfish   184 KADVESVRSTGLVPLDKLAKLADLERCAAAGATGNPGPQCSPRLG--HEYKTVHKLCLSPMSSLS 246

  Fly   410 DEIEED-DEDEVIDMD 424
            |...:| .|||.:::|
Zfish   247 DHTSQDCSEDEEVEID 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 26/55 (47%)
lbx1bNP_001156784.1 Homeodomain 122..178 CDD:459649 26/55 (47%)

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