Protein Alignment E5 and Hoxa6

DIOPT Version :10

• Sequence 1: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001178016.1
• Gene: Hoxa6 / 685732
• RGDID: 1590236
• Length: 233
• Species: Rattus norvegicus
• Alignment Length: 117
• Identity: 36/117 - (30%)
• Similarity: 51/117 - (43%)
• Gaps: 34/117 - (29%)

  Fly   275 PLYPWL----------LSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVV 329
            |:|||:          ...|||                  |.|..::..|.|:||..|..|.|:.
  Rat   135 PVYPWMQRMNSCAGAVYGSHGR------------------RGRQTYTRYQTLELEKEFHFNRYLT 181

  Fly   330 GAERKQLAQGLSLTETQVKVWFQNRRTKHKR------MQQEGGDGSDTKSNK 375
            ...|.::|..|.|||.|:|:||||||.|.|:      ..|..|:.|:.|:.:
  Rat   182 RRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQASGEDSEAKAGE 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E5	NP_524825.1	Homeodomain	304..360	CDD:459649	24/55 (44%)
Hoxa6	NP_001178016.1	Homeodomain	156..212	CDD:459649	25/73 (34%)