DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and pitx1

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001035436.3 Gene:pitx1 / 678598 ZFINID:ZDB-GENE-060421-3623 Length:285 Species:Danio rerio


Alignment Length:63 Identity:25/63 - (39%)
Similarity:42/63 - (66%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQ 363
            :|.:|.||.|:..||.:||..|:.|.|...:.|:::|...:|||.:|:|||:|||.|.::.::
Zfish    56 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 24/55 (44%)
pitx1NP_001035436.3 COG5576 8..>126 CDD:227863 25/63 (40%)
Homeodomain 59..115 CDD:459649 24/55 (44%)
OAR 247..263 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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