Protein Alignment E5 and Cdx2

DIOPT Version :9

• Sequence 1: NP_524825.1
• Gene: E5 / 45396
• FlyBaseID: FBgn0008646
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_076453.1
• Gene: Cdx2 / 66019
• RGDID: 621234
• Length: 310
• Species: Rattus norvegicus
• Alignment Length: 306
• Identity: 76/306 - (24%)
• Similarity: 106/306 - (34%)
• Gaps: 96/306 - (31%)

  Fly    86 PTNTNNSG--RRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDPSSG 148
            |::..:||  ...|:.::                ||    |..|:.||...||...|.:...|:.
  Rat    15 PSSVRHSGGLNLAPQNFV----------------SP----PQYPDYGGYHVAAAAAAAANLDSAQ 59

  Fly   149 TGNPPTLIRPLPLPAP-----NLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAAL-A 207
            :..|..   |....||     |....|...:.||:|       |..:...|..|..:...|.. |
  Rat    60 SPGPSW---PTAYGAPLREDWNGYAPGGAAAANAVA-------HGLNGGSPAAAMGYSSPAEYHA 114

  Fly   208 HHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPG--QIPLGIF----PGGPHPGHPPPHGH-HPFGS 265
            |||                  || .|||.|..  ....|:.    ||.|.|........ .|.|.
  Rat   115 HHH------------------PH-HHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPSGQ 160

  Fly   266 APHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQP-------FRKPKRVRTAFSPTQLLKLEHAFE 323
            ..:|..       |:         |.|.    ||       .|...:.|..::..|.|:||..|.
  Rat   161 RRNLCE-------WM---------RKPA----QPSLGSQVKTRTKDKYRVVYTDHQRLELEKEFH 205

  Fly   324 GNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKH-----KRMQQE 364
            .:.|:....:.:||..|.|:|.|||:||||||.|.     |::||:
  Rat   206 YSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQ 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
E5	NP_524825.1	Homeobox	307..359	CDD:278475	22/56 (39%)
Cdx2	NP_076453.1	Caudal_act	13..170	CDD:282574	46/219 (21%)
		Homeobox	189..241	CDD:278475	22/51 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.900