DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and meox2b

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_073787071.1 Gene:meox2b / 566969 ZFINID:ZDB-GENE-060503-853 Length:329 Species:Danio rerio


Alignment Length:310 Identity:87/310 - (28%)
Similarity:121/310 - (39%) Gaps:67/310 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 RSPSPPNAGGNPAAA----GNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRM 182
            |:|..|:...:||..    |.:.....|.            ||.|:|..:..|..:|......|:
Zfish    50 RNPHAPSQALHPAFTQALHGRSDHISYPD------------LPGPSPPCSYAGEESSFGGAHHRV 102

  Fly   183 AGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHG---PHPH-LPPGQIPL 243
                ||..|.|               ||.|..|....|:|.:.: ..||   |||. ..|.....
Zfish   103 ----HPAPQHP---------------HHPQHHQWHVPQMPSIES-ERHGLCLPHPDAAAPELCGT 147

  Fly   244 GIFPGGPHPGHPPPHGHHPFGSAPHLIRDSY------PLYPWLLSRHGR--IFPRFPGNFLFQPF 300
            |....|...|:|...|..|.|.:  .:...|      |:.|...|..|:  ......|::.....
Zfish   148 GAGSQGMCAGNPTLTGSDPSGVS--CVPGEYGRQNMSPVEPERRSSKGKSDSSDSQDGSYKSDVS 210

  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQ--Q 363
            .||::.||||:..|:.:||..|..::|:....|.::|..|.|||.||||||||||.|.||::  |
Zfish   211 SKPRKERTAFTKEQIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQ 275

  Fly   364 EGGDGSD---TKSNKGS------SSGGG-----GGGDGEDDAKHDGSQHS 399
            :|....:   ....||:      |...|     |....|||: ||..|.|
Zfish   276 QGAAAREKELVNVKKGTLLPSEFSPMVGLHHPIGSPSNEDDS-HDSDQSS 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 26/55 (47%)
meox2bXP_073787071.1 None

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