DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and nkx3-1

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001373254.1 Gene:nkx3-1 / 555375 ZFINID:ZDB-GENE-081104-238 Length:185 Species:Danio rerio


Alignment Length:75 Identity:38/75 - (50%)
Similarity:43/75 - (57%) Gaps:2/75 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 KPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGG 366
            |.||.|.||:..|:|:||..|....|:...||..||..|.|||||||:||||||.|.||.|....
Zfish    68 KKKRSRAAFTHLQVLELEKKFSRQRYLSAPERTHLASALHLTETQVKIWFQNRRYKTKRRQLTTE 132

  Fly   367 DGSD--TKSN 374
            ...|  .|||
Zfish   133 HSKDYFQKSN 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 30/55 (55%)
nkx3-1NP_001373254.1 COG5576 15..>136 CDD:227863 34/67 (51%)
Homeodomain 70..126 CDD:459649 30/55 (55%)

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