DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and HGTX

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:494 Identity:116/494 - (23%)
Similarity:162/494 - (32%) Gaps:165/494 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SVAASSTSVSASSTVSASASSKPKLAFS----IDS-----IVGESSTRSAPLRVSVISSPPPRSE 81
            |.:.|:|...|||.:.:.:|..|:...:    :||     :...||....|.:.|..:||||:.:
  Fly   176 SDSPSTTPPPASSRLHSDSSPSPRYEHNSSPGVDSAKSYALSQRSSGAEDPCQTSESASPPPQGQ 240

  Fly    82 SPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGGNPAAAGNTAKSGDPS 146
            :..||.|.                        |.||:....     :.|.||.|..|...:|:|.
  Fly   241 NDYSPENL------------------------SSQRAKFQH-----HHGVNPLALHNANHAGNPG 276

  Fly   147 SGTGN-------PPTLIRPLPLPA----------------------------PNLALIGNR---- 172
            ....|       |.:.:.| ||.|                            ||..||.:|    
  Fly   277 CHNNNNHMDHKLPLSFLGP-PLAALHSMTTEMKGQGVGGSSASANGLSYSHSPNSHLISDRGSGG 340

  Fly   173 ----TSPNAMAVRMAGPPHPP------SQPPPFLAA-----------QFQMAAALAHHHQQQQQQ 216
                :|.........|.|:|.      |:|||..:|           :|.:|||.|   ...|..
  Fly   341 SSSSSSTTTTNTNSQGAPNPHGIDTILSKPPPVTSAGLSALTGAGIPRFSIAAAAA---GMAQYL 402

  Fly   217 QQQQLPPVPTGPPHGPH----PHLP-PGQIPLGIFP--------GGPHPGHPPPHGHHPFGSAPH 268
            .|.|..|:.|   |..|    .||. ||...|...|        ..........|.|||...   
  Fly   403 SQSQGAPLKT---HAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSND--- 461

  Fly   269 LIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAER 333
              :|.                            |.|..|..||..|:..||..||...|:.|.||
  Fly   462 --KDG----------------------------KKKHTRPTFSGQQIFALEKTFEQTKYLAGPER 496

  Fly   334 KQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQH 398
            .:||..|.::|:||||||||||||.::..     .::..:.|......||..||:.....|....
  Fly   497 AKLAYALGMSESQVKVWFQNRRTKWRKRH-----AAEMATAKRKQDDMGGDNDGDCSETMDSDNE 556

  Fly   399 SYEDAEDPEDEDEIEEDDEDEVIDMDDYGSEMDAEEHQR 437
            |.:..|.|........:..         ||....:::.|
  Fly   557 SLDMGESPAQNKRCRSNSS---------GSSQQQQDNYR 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 29/55 (53%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 50/238 (21%)
Homeodomain 465..523 CDD:459649 30/57 (53%)

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