DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and Hoxb7

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001017480.1 Gene:Hoxb7 / 497985 RGDID:1559918 Length:219 Species:Rattus norvegicus


Alignment Length:217 Identity:60/217 - (27%)
Similarity:82/217 - (37%) Gaps:65/217 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFP 289
            |..|.:|..|..|......|::.||         |.....||..:....|.|.|...:.|...|.
  Rat    38 PQRPGYGAGPGAPFSASVQGLYSGG---------GGMAGQSAAGVYEAGYGLEPSSFNMHCAPFE 93

  Fly   290 R-----FPG--------------------NFLFQPFRKP-----KRVRTAFSPTQLLKLEHAFEG 324
            :     .||                    ||...|:.:.     ||.|..::..|.|:||..|..
  Rat    94 QNLSGVCPGDPAKAAGAKEQRDSDLAAESNFRIYPWMRSSGTERKRGRQTYTRYQTLELEKEFHY 158

  Fly   325 NHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGGDGSDTKSNKGSSSGGGGGGDGED 389
            |.|:....|.::|..|.|||.|:|:||||||.|.|            |.||.|    |.|..|:|
  Rat   159 NRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK------------KENKTS----GPGTTGQD 207

  Fly   390 DAKHDGSQHSYEDAEDPEDEDE 411
            .|          :|::.|:|:|
  Rat   208 KA----------EADEEEEEEE 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 25/55 (45%)
Hoxb7NP_001017480.1 Antp-type hexapeptide 126..131 1/4 (25%)
Homeodomain 138..194 CDD:459649 26/67 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..219 13/51 (25%)

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