DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E5 and Dr

DIOPT Version :9

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:551 Identity:129/551 - (23%)
Similarity:178/551 - (32%) Gaps:230/551 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VTCGRQTFNMLPMAPTSPFVSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDSIVGESSTRSA 66
            ||..|||.       |||.|..||:..|.:..:::||:.|.|.|..   ..|..::...:.|..:
  Fly    11 VTGLRQTM-------TSPTVPPSSNTPAGNLIITSSSSNSGSNSGS---NMSSGNMTSSNLTNLS 65

  Fly    67 PLRVSVISSPPPRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPS------ 125
            |       |.|....:.||||        :|...:...::..|.:.:..|:....:..:      
  Fly    66 P-------SHPAGLNALASPT--------SPSALLLAHQQHLLQQHQQHQQQQQQQQQAAALQLA 115

  Fly   126 ---PPNAGGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNR-------TSPNAMAV 180
               ||        |.:..|:....|.......|....|...||.|..|.:       |||.:.| 
  Fly   116 AVHPP--------AHHLHKTTSRLSNFSVASLLADTRPRTPPNQAADGPQNLTSSAATSPISQA- 171

  Fly   181 RMAGPPHPPSQPPPFLAAQFQMAAALAHH-------------HQQQQ------QQQQQQL----- 221
             .:.||.||:.....:.|.....||:|||             |.|.|      :|||||.     
  Fly   172 -SSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQQQQADARAN 235

  Fly   222 -PPVPTG---------------------------------------------------------- 227
             ||..|.                                                          
  Fly   236 SPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEEMLQDHEADHDEEED 300

  Fly   228 -----------------------------PPHGPHP--H----------LPPGQIPL-------- 243
                                         .||||.|  |          |..|.:|:        
  Fly   301 SIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPPGSHMQSTILSPAALASGHVPIRPTPFSAL 365

  Fly   244 --------GIFPGGPHPG---HPP--PHGHHP---FG---SAPHLIRDSYPLYPWLLSRHGRIFP 289
                    |:..|.|.||   .||  |.|..|   ||   :.|..|:.:       |.:|     
  Fly   366 AAAAVAWTGMGGGVPWPGTRQMPPFGPPGMFPGAGFGGDANEPPRIKCN-------LRKH----- 418

  Fly   290 RFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNR 354
                    :|.|||   ||.|:..|||.||..|....|:..|||.:.:..|.|||||||:|||||
  Fly   419 --------KPNRKP---RTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNR 472

  Fly   355 RTKHKRMQQEGGDGSDTKSNKGSSSGGGGGG 385
            |.|.||:|:     ::.:..|.::.|.|..|
  Fly   473 RAKAKRLQE-----AEIEKIKMAALGRGAPG 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeobox 307..359 CDD:278475 28/51 (55%)
DrNP_477324.1 Homeobox 424..477 CDD:278475 29/55 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I2937
eggNOG 1 0.900 - - E1_KOG0850
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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