DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and C15

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster


Alignment Length:408 Identity:90/408 - (22%)
Similarity:130/408 - (31%) Gaps:138/408 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDS-IVGESSTRSAPLRVSVISSPPPR----- 79
            |.|.|.::..|.|.......|....|:..|:.|:.| ....||:.:.|..:|.:.|.|..     
  Fly    28 VDSDSRMSCGSGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHH 92

  Fly    80 --------SESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSPPNAGGNPAAA 136
                    |.||.|.:|.||||.:.....:..:....|         ....:.|..|:....|||
  Fly    93 HNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDL---------AYKLATSIANSTYGSAAA 148

  Fly   137 GNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQ 201
            ..:.....||:..|:                           .:|:     ||.:.|...|....
  Fly   149 LYSYPHLYPSAAGGH---------------------------VLRV-----PPQRTPLTWALPPL 181

  Fly   202 MAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSA 266
            ..|||||      |..:.:|                ....|:....|.|:....||         
  Fly   182 HHAALAH------QAVKDRL----------------AAAFPIARRIGHPYQNRTPP--------- 215

  Fly   267 PHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGA 331
                                               |.|:.||:|:..|:.:||..|....|:..|
  Fly   216 -----------------------------------KRKKPRTSFTRIQVAELEKRFHKQKYLASA 245

  Fly   332 ERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEGGDGSDTKSNK-----------------GSSS 379
            ||..||:||.:|:.|||.||||||||.:|...|..:.....:|:                 .:..
  Fly   246 ERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAPPSAPL 310

  Fly   380 GGGGGGDGEDDAKHDGSQ 397
            |..||.:|...|...|.|
  Fly   311 GSQGGVNGAPLAALHGLQ 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 28/55 (51%)
C15NP_476873.2 COG5576 <196..315 CDD:227863 38/162 (23%)
Homeodomain 218..274 CDD:459649 28/55 (51%)

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