DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and HHEX

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster


Alignment Length:394 Identity:104/394 - (26%)
Similarity:146/394 - (37%) Gaps:100/394 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ASSKPKLAFSIDSIVGE--SSTRSAPLRVSVISSPPPRSESPASPTNTNNSGRRTPRGYIYCRRR 106
            |:...|.||||::|:.:  ||.||...|.|        |:||.:.|    :|..||......:  
  Fly     4 ATKSSKAAFSIENILEQKSSSHRSQSRRGS--------SQSPVAVT----AGIATPHALAMPK-- 54

  Fly   107 DSLDRSRSPQRSPVSRSPSPPNA------GGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPN 165
                .|.:...|..:.:|||.:|      ....|||....||.|.|:...  ||.:|..|:....
  Fly    55 ----ASLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLA--PTSLRFNPIYPDP 113

  Fly   166 LALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPH 230
            .:|...:.        :....:|....|.|.||....|||:      |......|..|. |....
  Fly   114 ASLFYQQV--------LQLQKNPSLFMPHFQAAAVAAAAAV------QPTAYCDQYSPF-TMDCE 163

  Fly   231 GPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGNF 295
            |              ||             :|..:|..|..::||...:.:|..|          
  Fly   164 G--------------FP-------------NPASAAAALYCNAYPAASFYMSNFG---------- 191

  Fly   296 LFQPFRKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKR 360
               ..||..::|  |:..|...||..|..:.|:...||:.||..|.||:.|||.||||||.|.:|
  Fly   192 ---VKRKGGQIR--FTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRR 251

  Fly   361 MQQE----------GGDGSDTKSNKGSSSG-----GGGGGDGEDDAKHDGSQHSYEDAEDPEDED 410
            ....          .|....:.|:..|||.     |.|...|:...:.|....|.:|.:|.|||.
  Fly   252 ANLSKRSASAQGPIAGAAVGSPSSASSSSVPVLNLGSGSRCGQQSDEEDRMYLSEDDEDDDEDEG 316

  Fly   411 EIEE 414
            |.:|
  Fly   317 EADE 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 24/55 (44%)
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 24/52 (46%)

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