DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and msx2

DIOPT Version :9

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_002936749.1 Gene:msx2 / 394987 XenbaseID:XB-GENE-852974 Length:256 Species:Xenopus tropicalis


Alignment Length:176 Identity:56/176 - (31%)
Similarity:70/176 - (39%) Gaps:61/176 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 GGPHPGHPPPHGHH------PFG------------SAPHL------------------IRDSYPL 276
            |..||...|...|.      ||.            .||||                  |||| |.
 Frog    17 GQVHPTLSPSDDHKIKVSSLPFSVEALMADKRVPKEAPHLRGVDASAAGSTPRHLHMGIRDS-PS 80

  Fly   277 YPWLL------------SRHGRIFPRFPGNFLFQP---------FRKPK---RVRTAFSPTQLLK 317
            .|.|.            |..|..:.:..|::...|         .||.|   :.||.|:.:|||.
 Frog    81 PPGLTKTFETSSVKSENSEDGTTWSKDGGSYSPPPRHLSPSTCTLRKHKTNRKPRTPFTTSQLLA 145

  Fly   318 LEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQ 363
            ||..|....|:..|||.:.:..|:|||||||:||||||.|.||:|:
 Frog   146 LERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQE 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeobox 307..359 CDD:278475 28/51 (55%)
msx2XP_002936749.1 Homeobox 134..188 CDD:365835 28/53 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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