DRSC/TRiP Functional Genomics Resources

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Protein Alignment E5 and Dbx

DIOPT Version :10

Sequence 1:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster


Alignment Length:647 Identity:147/647 - (22%)
Similarity:207/647 - (31%) Gaps:226/647 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VAASSTSV-SASSTVSASASSKPKLAFSIDSIVGESSTRSAPLRVSVISSPP------------- 77
            |....||: :..:|:....:|||.|.||:.:|:|:  ||.. :||......|             
  Fly   129 VEPKETSMPTVGNTILKDTNSKPILKFSVSAILGD--TREG-VRVRNEFMQPQHIWPYLQQNFMQ 190

  Fly    78 --------------PRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPVSRSPSP-- 126
                          |.|.....|..........|..:.:.........:..|..:.::....|  
  Fly   191 QHSHQYQQHHQQQQPHSHPQHQPLAVPGHQHSHPHSHHHHHHHPGAGHAHFPHPAFLTHQLPPHQ 255

  Fly   127 ------------------PNAGGNPAAAGNTAKSGDPS----------SGTGNPPTLIRPLPLPA 163
                              |....:.::.|:|....|.:          |||||.           
  Fly   256 HHQQQQHVQQQHPGNSCQPQTASSSSSPGSTISDSDNNHGASTANGNGSGTGNS----------- 309

  Fly   164 PNLALIGNRTSPNAMAVRMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPT-- 226
                  |....|:.:|         .|.|....:|..::.        |.:|||||.|....|  
  Fly   310 ------GQDARPHELA---------NSNPDEDSSASRRLT--------QDKQQQQQLLGAGGTGG 351

  Fly   227 ----GPPHGPHPHLPPGQIPLGIFPGGPHPGHPPPHGHHPFGSAPHL------IRDSYPLYPWLL 281
                |..|| ||..||...|..|  ..|.|..|.|...|.. :.|||      .|:.|      :
  Fly   352 GGGGGHGHG-HPTPPPPPPPPVI--AKPMPSRPTPFLPHTL-NHPHLHSLLAHCRNPY------M 406

  Fly   282 SRHGRIFPRFPGNFLFQPF-------RKPKR---VRTAFSPTQLLKLEHAFEGNHYVVGAERKQL 336
            |...::||..||    |.|       .||:|   .|..||.:|...||..|:...|:...:||:|
  Fly   407 SVGAQVFPLPPG----QGFPWAHSTRGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKL 467

  Fly   337 AQGLSLTETQVKVWFQNRR-----TKHKRMQQEGGDGSDTKSNK--------------------- 375
            |:.|.|.::|||:||||||     :|.:.:...||....|..||                     
  Fly   468 AERLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSRDQTLPNKNNPNPDLSDAKCDRPLTPLSP 532

  Fly   376 ------GSSSGGGGGGDGEDD----AKHDGSQHSYEDAEDP------------------------ 406
                  ||::....|...:|:    |....|..|......|                        
  Fly   533 SLLSPNGSATPPPPGAVAKDEPPTAAVTPKSPQSVSSRSSPSVGYGLQISSPPPLLTSLKMGDQS 597

  Fly   407 --------------------------EDEDEIEEDDEDEVIDMD-DYGSEMDAEE-HQRLREQFQ 443
                                      |.:.:|..:.:.:::..| .:..|...:| .||..||.|
  Fly   598 ASATPTPLPGTTVSSAAASPPGVTASEFQAKINAEMQKQLVAADLKFKLENSIQEAKQRRFEQLQ 662

  Fly   444 QQLAQHQQQFMQQN------AGEAATLSPQQQHQLLQQHQQHLQQQHHQQQQHFIQQQQQLY 499
            ||| .|...|....      |..||.|....|.|..||.|||.||||.|||.....:..:||
  Fly   663 QQL-HHSPHFSAMREVELAAAAAAAQLHHHHQQQQQQQQQQHAQQQHAQQQHQGGSEFMKLY 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E5NP_524825.1 Homeodomain 304..360 CDD:459649 25/63 (40%)
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 23/53 (43%)

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